Anoplopoma fimbria (sablefish): 129113539
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Entry
129113539 CDS
T09102
Symbol
vtnb
Name
(RefSeq) vitronectin b
KO
K06251
vitronectin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04510
Focal adhesion
afb04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129113539 (vtnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129113539 (vtnb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129113539 (vtnb)
00536 Glycosaminoglycan binding proteins [BR:
afb00536
]
129113539 (vtnb)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129113539 (vtnb)
Glycosaminoglycan binding proteins [BR:
afb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129113539 (vtnb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
PGC7_Stella
Motif
Other DBs
NCBI-GeneID:
129113539
NCBI-ProteinID:
XP_054481870
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All DBs
Position
24:14922183..14926529
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AA seq
447 aa
AA seq
DB search
MKPAVALLGLVLLLDTTFAAEKSCVGRCGSFDPQTKCQCDTMCVYYGSCCGDFDVICPKK
TARGDTFEEADEVTEALTTITENPTLLPTFNTVAATVTAPPTFIKTQGSAPSVVPDAAAC
SGRPFDAFLQLKNGSIYAFRGEYFFELDDKSVLPGFPKLIEDVWGIPGPVDAAFTRINCQ
GKSYIFKGKQYWRFDGDVLDADYPRDISVGFDGIPNDVDASFTIPAPSHRGKEKAYFFKG
DNYYQYAFKHQPSHEECVLMSRTSPSVLFTRYTDLFCDQTWEDFFTELFESSISSYQTGP
RLTSRDWQGVSPPVDAAMVGRVYLSPKPTPSSPPPARRRSSRKRRPSRKRAQRRRQSRHV
LLDDLWGYDDWFAYSDYSDSFEESPTQQYKSTPVQNVYFFKKDKYYRVDLQTKRVDSANP
PYPRSIAKYWLGCKQEETPDASRAEKR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagcagtggctctactgggcctcgtcctcctgctggacaccacctttgctgca
gaaaagtcctgtgtgggtcgctgtggctccttcgacccgcagacaaaatgccagtgtgac
accatgtgtgtgtactatgggagctgctgtggggactttgacgtcatctgccctaaaaaa
actgctcgtggcgataccttcgaggaagcagatgaagtaacagaagcattgacgactatc
acagaaaatccaacgctcctgccaactttcaacacagttgcagctactgtaactgcccct
cccacatttatcaagacacaagggtctgcaccctctgtagtccctgacgcagcggcctgc
agtggacgaccttttgatgcttttctgcagctgaagaatggctcgatatatgcttttaga
ggtgaatatttctttgagttggatgacaaatccgtacttcctggcttcccaaaactcatc
gaggatgtgtgggggatccctggacccgtagacgccgcattcacacgcatcaactgccag
ggaaaatcgtacatctttaaggggaaacagtactggaggtttgacggcgatgttctggat
gcggactatccgcgggacatttcagttggctttgatggcataccaaatgacgtcgatgcc
tctttcaccataccagcaccaagtcaccgcggcaaagagaaagcctactttttcaaaggg
gacaattattaccagtatgcgttcaagcaccagccttcccatgaggagtgcgtcctgatg
agcaggacctcaccctctgtgctgttcacacgatacacagacctcttctgcgatcagaca
tgggaggatttcttcaccgagctctttgaaagttccataagcagttaccaaacaggccct
cgcctaaccagtagggactggcagggcgtcagtcctcctgtagatgctgccatggtggga
cgagtctacctcagccccaaacccacgccatcttctcctccaccagcgaggaggcgcagc
agtcggaagaggaggcccagcaggaagcgagcccagcgaagaaggcagagtcgccacgtg
ttgcttgatgatttgtggggttatgatgattggtttgcctacagcgactacagcgacagc
tttgaggagagcccaacgcagcagtacaaaagtacccccgttcaaaatgtgtactttttc
aagaaagataaatactacagagtggatctgcagacaaaacgtgtggactctgccaaccct
ccctacccacgatccattgcgaaatactggctgggctgcaagcaggaagagacacctgat
gcatcacgggcagagaagagatag
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