Anoplopoma fimbria (sablefish): 129116619
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Entry
129116619 CDS
T09102
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129116619 (ubtfl)
03021 Transcription machinery [BR:
afb03021
]
129116619 (ubtfl)
Transcription factors [BR:
afb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
129116619 (ubtfl)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
129116619 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
DUF4473
Poxvirus_B22R_N
Motif
Other DBs
NCBI-GeneID:
129116619
NCBI-ProteinID:
XP_054483411
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All DBs
Position
3:complement(329804..341684)
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AA seq
707 aa
AA seq
DB search
MMNGSSSSVSAAQSSRIKNEPDEWTKEDCLTLLERIRALLPDTDGMKYKTTESHFDWEKV
CFGSFTGEMCRQKWQRVSTEVRKYRTMTELLVDAMEFVKNPYKGKKLKTHPDFPKKPLTP
YFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMAR
FKEEHPELIEERKKSDLPEKPKTPQQLWYNHEKKTYLKLHPEVSQKELKEALRRQWSQLS
DKRRLKWISKALELQKDYEGSMRAYHDAHPDVTSDDHVRSVLTKAERQLKDKFDGRPTKP
PPNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQRKKQYDVDLQR
FLESLPDEERDRVMGEEKLGGARGGVGASPHRAKSPAKVVSLLSPQERCREAEPETWTPA
GQPRERRDRKKTVKLPETPKTAEEMWQHSVMGDYLAKYRSDRRKAQTAIEAAWRSMEKKE
KIPWIKKAAEDQKRYEVQYQPVRELLEMRSPPAAQRKPKFDGEPKKPPVSGYQMFSQELL
TNGELNHFSLKERMVEIGKRWHKLSQSQKDKYKKMVEEQQGEYKAELEDWVQSLSPQDQA
VYKEFSSSKRRSTAKARSSPGAKVRVTAKGKAAGSRAATQPVGVAKRAMAYRAKQDMSDS
TEKSDSSDSDEDDETSGSTDSEEDDENDDEDDDDQSSSEESSDSDSD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcagcagcagcagcgtctcggcagctcagagctccaggatcaaaaatgaa
ccagacgagtggacgaaggaggactgtctgactctgctggagaggatccgcgctctgctg
ccggacaccgacggcatgaagtataaaaccacggagtcgcacttcgactgggagaaagtt
tgtttcggcagcttcaccggagaaatgtgccggcagaaatggcagagagtttccactgag
gtccgtaagtacagaacgatgacggagctcctcgtagacgccatggagttcgtaaagaat
ccgtacaaaggaaagaagctgaagactcatccggatttccccaaaaaacctctgactccg
tacttccgcttcttcatggagaaacgagccaaatacgccaaaatccacccggagatgagc
aacctggacctgaccaagatcctgtccaagaagtacaaggagctgcccgacaagaagaag
caaaagtacatcacagagtttcagcgggagaaagaagagtttgagaagaacatggctcga
ttcaaggaggaacatccagaactgattgaagaaaggaagaagtccgacctgccggagaaa
cctaaaactcctcaacagctgtggtacaaccacgagaagaagacctacctgaagctgcac
ccggaggtgagtcagaaggagctgaaggaggctctgaggagacagtggtcccaactgtct
gacaagaggagactcaagtggatcagcaaggccctggagctccagaaagactacgagggc
agtatgagagcataccatgacgctcatccagatgtgacctctgatgatcacgttcggtcc
gtcctcactaaagcagagagacagctgaaggacaaatttgatggacggccgacaaaacca
ccacctaacgggtactctctgtactgtgccgagctgatggtgaacatgaaggacgtcccc
agcacagagcggatggtgctctgcagtaaacagtggaagatgatgacgcagaaggagaag
gacatgtttcagaaacgctgcgagcagaggaagaagcagtacgacgtggacctgcagagg
tttctggagagtcttccggacgaggagcgagaccgagtcatgggcgaggaaaaactggga
ggggccagagggggcgtgggcgccagcccgcacagagccaagtctccggccaaggtggtg
tctctcctctcaccccaggagcgctgtcgggaggcggagccagagacgtggacgcctgca
ggacaaccacgagagcggcgggacaggaagaagacggtgaagcttcctgagacgccaaaa
accgccgaggagatgtggcagcacagcgtgatgggagactacctggctaaatacagaagc
gaccggaggaaggctcagactgccatcgaggcggcctggaggtcgatggagaagaaggag
aagattccctggatcaagaaggcggcggaggaccagaagcgttacgaggttcagtaccaa
cctgtgagggagctgttggagatgaggagtccaccagctgctcagaggaaacccaagttt
gatggagaaccaaagaaacctccagtgagcggctaccagatgttctcccaggagctgctg
accaacggggagctgaaccacttcagcctgaaggagcgcatggtggagatcgggaagagg
tggcacaaactgagccagagtcagaaggacaagtacaagaagatggtggaggagcagcag
ggggagtacaaggccgagctggaggactgggtccagtctctgtctcctcaggaccaggcc
gtctacaaagagttctcctcctcgaagcgtcgcagcaccgctaaagctcgcagcagtcca
ggagctaaagtccgggtgacggccaaggggaaggcggccggatcgagagccgccacgcaa
ccggtcggggtcgccaagagggccatggcgtaccgagccaagcaggacatgtccgactcg
acggagaagagcgactcctccgactctgatgaagacgatgagacgtcaggaagcacagac
agtgaggaagatgatgagaacgatgacgaggatgatgatgatcagagctcctcagaggaa
tccagtgactcggactcggactag
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