Alistipes finegoldii: Alfi_2297
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Entry
Alfi_2297 CDS
T02133
Name
(GenBank) A/G-specific DNA-adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
afd
Alistipes finegoldii
Pathway
afd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Alfi_2297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afd03400
]
Alfi_2297
Enzymes [BR:
afd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Alfi_2297
DNA repair and recombination proteins [BR:
afd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Alfi_2297
Prokaryotic type
Alfi_2297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-ProteinID:
AFL78576
UniProt:
I3YNK8
LinkDB
All DBs
Position
2569762..2570799
Genome browser
AA seq
345 aa
AA seq
DB search
MDNISDILLDWYARHGRDLPWRRTRDPYRIWLSEVILQQTRVAQGMDYYLRFTERFPDVG
SLAAAPEDEVLKLWQGLGYYSRACNLHAAARQVAERFGGVFPRSYDEVRSLRGVGDYTAA
AVCSAAYDAPCAVLDGNVFRVLARLFDIDLPIDSTAGKRTFAELAQTQLDMRCPGRYNQA
VMDFGALQCTPAQPGCADCPLAARCLALAAGTVAERPVKQAKTKVRDRWFNYLHVTCGDR
TLLRRRGEGDIWQGLYEFPMIETDRAADFSELTDSEEFRTVLGGVEWRLLRSVAMPKHQL
SHQTLHAVFHRFEIFSPVDFPSVPTATLGDYAVPRLIDRYLDRQP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatttccgatatattgctggactggtacgcccgacacggccgcgatctgcct
tggagacgcacccgcgatccttaccgcatctggctttccgaagttatcctccagcagacc
cgcgtcgcacagggcatggactattacctgcgcttcacggagcgctttcccgacgtcggg
tcgctggccgccgctccggaggacgaggtgctcaagttgtggcagggactcggctattac
agccgtgcgtgcaacctgcacgctgcggcgcggcaggtcgcggagcggttcggaggcgtg
tttccccggtcttacgacgaggtccgctcgctgcggggcgtcggcgactataccgccgcg
gccgtctgctcggccgcttacgacgctccctgcgccgtgctcgacggcaatgttttccgg
gtgctggcgcggcttttcgatatcgaccttccgatcgactccacggccggaaagcgcacg
ttcgctgaattggcgcaaacgcagctcgatatgcgttgtccggggcgttacaatcaggcc
gtcatggatttcggggcgctgcaatgcactccggcgcagcccggatgcgccgactgtccg
cttgcggcgcgctgtctggctctggccgcaggaacggttgcggagcgtcccgtcaagcag
gcgaaaaccaaggtgcgcgaccgttggttcaactacctgcacgtcacatgcggcgaccgg
accttgttgcggcggcgcggggaaggcgacatctggcagggattgtacgagtttccgatg
atcgagacggaccgtgcggcggatttctcggaactaaccgattcggaagagttccgaacc
gtgttgggtggcgtcgaatggcgtctgctgcggagcgttgcaatgccgaaacaccagctc
tcgcaccagacgctgcatgccgtgttccaccgcttcgagatcttttcccctgtggatttc
ccctccgtgccgaccgccacgctgggcgactatgccgtgccgcggctgatcgaccgctat
ctggaccggcagccgtga
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