Aspergillus fumigatus: AFUA_5G12050
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Entry
AFUA_5G12050 CDS
T01017
Name
(RefSeq) DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
afm
Aspergillus fumigatus
Pathway
afm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AFUA_5G12050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afm03400
]
AFUA_5G12050
Enzymes [BR:
afm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AFUA_5G12050
DNA repair and recombination proteins [BR:
afm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AFUA_5G12050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT_2
RNA_ligase
BRCT
DNA_ligase_IV
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
3511447
NCBI-ProteinID:
XP_753446
UniProt:
Q4WVG8
LinkDB
All DBs
Position
5:complement(3118068..3121476)
Genome browser
AA seq
979 aa
AA seq
DB search
MDSDEIMPDEEHPNVPVGDEESDIDEKYPNRPRNHSPTLPFHELFQTLFNPLGEIKKKPA
GAVAARRKVGPHGQSAANLNPLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRA
MYGIKEKAIGKMLVKIMKIDKNSEDGFNLLNWKLPGQAATSRMTGDFAGRCFDVISKRPM
RTDVGDMLIEEVNEKLDKLSAASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGAT
ERTFFDVWHPDAENLYSISSSLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMDS
LDRMVARMRPTEEDPVFWIEEKLDGERMQLHMASDDSVPGGRRFRFWSRKAKEYTYLYGN
GIYDENGSLTRYLKDAFADGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFST
TGARPLLRVFDILYLNGRDLTGYTLRDRRKALQKAVRPVHRRFEIHPYEEATTKDQVEAA
LRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGRRG
GNLSSFLCGLRVDDGHASQGASASKCYSFCKVGGGFNAADYANIRHHTDGKWMEWNPKKP
PTAYIELAGRDAQYERPDMWIKPEDSVVICVKAASVSASDQFRLGLTLRFPRFKRLRMDK
DWKSALSVQEFLDLKSNVEQEHREKELNVDNSRRKRVKRTAKKPLTVAGYDMDEDVKYAG
PSGHIFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMFFQTNNAAPHTICVADRRTVKA
ASLQKRGDVDIIRPSWIIDCVKQNEIDAGLPDFLLPFEPRHMFFATPGKHDEVASNVDQF
GDSYARDTTSEELSDCPESITKLIERLQESVNSGHEMPCGLLFKSLTILFPHRNDDVSES
EAKTSSHPSITHVVIDPESSSKEISSLRGKWSRKPGRKVPHIVTVDWVEESWKSRTLLDE
ERFQPKRCISGIAKPYWPG
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggactctgacgagattatgcctgatgaggagcatccaaatgttcctgtcggtgacgag
gagtcggacattgacgaaaaatatcccaaccggccccgtaaccattccccaaccctacct
ttccacgagcttttccagaccctcttcaaccctctgggcgaaataaaaaagaagccagcc
ggagcggttgcggctcgcaggaaagtcggtccccatgggcagtcagcggccaatctcaat
ccgctggagagacgacgcgatgtgattgagcgatttatctcgcggtggaggaaagaagtg
ggtgatgatatataccccgcctttcgactaattcttccggacaaggatcgggaccgggcc
atgtacggaatcaaggagaaggctattggcaaaatgcttgtcaagattatgaaaattgac
aagaactccgaggatggctttaacctgttgaactggaagctgcctggacaagcagctacc
tccaggatgacgggcgactttgcggggcgatgtttcgatgtcatctcgaagcgacccatg
cggactgatgtgggagacatgttgattgaggaggttaacgagaagctggacaagttatcg
gcggcttccaaggaggagcagcagctgcccatccttgcggagttttaccgacgcatgaat
cccgaggaactcatgtggttgattcgtatcatcctccggcagatgaaggtaggagcgacg
gagcggaccttctttgacgtctggcatccggacgcggagaatctctacagtatttcgagt
agtctccggcgtgtctgctgggagctacacgatccgaatattcggctggatgctgaggac
agaggaatcagcctgatgcagtgcttccagccgcagctggctcagttccaaatggattcg
ttggaccgcatggtcgctcggatgagaccgacggaggaagatcctgtcttctggatagag
gagaagctggatggcgagcgcatgcagcttcatatggcatctgacgattcagtacctggc
ggcagacgattccgtttctggtcaagaaaagcgaaagaatacacatatttatacggcaat
ggtatttatgatgaaaatgggtctctgacgaggtatctcaaggatgcttttgcagatggg
gtccagagcctgattctggatggtgaaatgatcacatgggaccccgagcaagacgctccc
gcacctttcggtacactcaagactgctgcattgtctgaacagcggaatccgttctccacg
acaggcgctcggccgctgctacgtgtctttgacatactgtatcttaatgggcgagactta
actggctacacacttcgtgatcgtcgcaaagctttgcagaaggctgtccgccctgtccat
cgcagatttgaaatacatccctacgaagaagctacaactaaagatcaggtcgaagctgcg
cttagaaaggtggtagctgaagcttccgagggtttggtgctcaagaaccctcggtcacct
taccgcctgaacgagagacacgatgactggatgaaggtgaagcctgagtacatgaccgag
ttcggagagtctttagatctcatcgtcatcggtgggtactatggctccggtcgtcgaggc
ggcaacctttcaagttttctttgcgggctaagagttgacgatggccatgcctctcagggt
gcgagcgcgtcaaagtgctactccttctgcaaagttggaggtggctttaatgccgctgat
tatgcaaatatccgtcatcacaccgatggtaaatggatggagtggaacccaaagaaacct
ccaacggcgtatatcgaattggcaggtcgagatgctcaatatgagcgaccggacatgtgg
atcaagccggaagactcagtcgtcatctgtgtcaaagcagcctctgtatcagctagtgac
cagtttcggcttgggctgactttgcggtttccacgtttcaaaaggctgcgcatggacaaa
gattggaaaagtgctctgtctgtgcaggaattcctagatctcaagtcgaacgttgagcag
gagcaccgggaaaaggaactgaacgtggacaattcccgtaggaaacgcgtcaagaggaca
gcgaagaagcctctcacggttgctggatacgacatggacgaagatgtcaagtatgctggt
ccatctgggcatatatttgacggattgaacttttatattctgacagattcgagtgcgccc
atcaagaaaacaaagcctgagctagagcagcttgtcaaagctaacggtggcatgttcttc
caaactaacaatgcagctcctcatacaatctgtgtggcggacagaagaacggtaaaagct
gcctcgttacagaagagaggcgatgtggatataatccggccgtcctggattattgattgt
gtgaagcagaatgagattgacgcggggctacccgacttcctgctcccttttgagcctagg
cacatgttcttcgccacgccgggcaagcacgacgaagtggcatccaatgtagaccaattt
ggcgatagttacgctcgtgacactacaagcgaggagctcagtgattgtccagagtccatc
acgaaactcattgaacgcctccaagaaagtgtcaattccggacatgaaatgccatgtggg
ttgctcttcaagagtcttacgatactcttcccacatagaaatgacgatgtgtcagagtct
gaagccaagacctcaagccatccctcgatcacccatgtcgttatagatccagaaagctcg
tcaaaagaaatatcttcactacgagggaagtggtccagaaagcctgggaggaaggtacca
cacatagtcactgttgactgggtagaagagagctggaaaagtcgaacgctattggacgag
gagagattccagcccaaacgatgcatatctggcatcgctaaaccgtattggccaggatga
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