Acidithiobacillus ferrooxidans ATCC 23270: AFE_0203
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Entry
AFE_0203 CDS
T00810
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00470
D-Amino acid metabolism
afr00550
Peptidoglycan biosynthesis
afr01100
Metabolic pathways
afr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AFE_0203 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFE_0203 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AFE_0203 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afr01011
]
AFE_0203 (ddlB)
Enzymes [BR:
afr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AFE_0203 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
afr01011
]
Precursor biosynthesis
Amino acid ligase
AFE_0203 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
TTL
ATP-grasp_4
ATPgrasp_ST
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
ACK78050
UniProt:
B7J3U9
LinkDB
All DBs
Position
complement(179117..180043)
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AA seq
308 aa
AA seq
DB search
MSDLARIAVLYGGPSGEREVSLDSGHAVLQTLQGLGMDAVGVDIQPAILQQQMAESGAQI
AFNVCHGAVGEDGLLQACLETLDMPYTGSGVLASALAMDKWRCKQLWRAAGLPVTDGILL
HRGSHTPDLGARFGWPLYIKPNHGGSSLGVSKVGGPAELDAALQCAFAIEDEVLCEGAVI
GHEVTVGILDGQALPPIVIETPRAFYDYTAKYLADDTRYLLPSGLGAPLEQQLQALALRA
FAELGCRDWGRVDFMIGGDGRPHLLEVNSVPGMTSHSLIPMAAKATGMGFPELCATILRT
AQRRVKHG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttagcccgcatcgccgtactttacggaggcccctccggagaacgcgaagtc
tctctcgacagcggtcacgccgtgttgcaaaccttgcaggggctgggcatggatgccgtc
ggcgtcgacatccagccggccatcctccagcagcaaatggccgaaagcggagcacagatc
gccttcaacgtctgccatggcgcggtaggcgaagacggtctgttgcaggcctgcctggag
actctggatatgccctacaccggcagcggtgtcctcgcctccgctctcgccatggataaa
tggcgctgcaagcagctctggcgagccgccggtttaccggtgaccgacggcatcctgctg
catcgcggcagccatacgcccgacctcggcgcccgcttcggctggcccctgtacatcaag
ccgaaccacggtggctccagcctcggggtcagcaaagtcggcggcccggcggaattggat
gcggccttgcagtgcgccttcgccatcgaggatgaagtcctctgcgagggtgccgtcatc
ggtcacgaagtcaccgtcggcatcctcgatggccaggcgctgccgccgatcgtcatcgaa
acgccccgggccttctatgactacaccgccaagtatctcgccgacgatacccgttatctc
ctgccctccggcctcggcgctccgctggagcagcagttgcaggcacttgcgctccgagcc
tttgccgagctcggctgccgcgactgggggcgggtcgacttcatgatcggcggcgacggt
cgaccccatctgctggaagtcaacagtgtgcccggcatgaccagccacagcctgattccc
atggccgccaaagccaccggcatgggcttcccggaattatgcgccaccatactgcgcacc
gcgcagaggagagtgaaacatggttag
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