Actinoplanes friuliensis: AFR_20180
Help
Entry
AFR_20180 CDS
T02892
Name
(GenBank) PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Organism
afs
Actinoplanes friuliensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_3
PAS_4
PAS_9
PAS
PAS_11
PAS_8
PsbJ
Motif
Other DBs
NCBI-ProteinID:
AGZ42308
UniProt:
U5VZ92
LinkDB
All DBs
Position
complement(4410213..4411655)
Genome browser
AA seq
480 aa
AA seq
DB search
MHPLLARGARIARNGMEPLVVLTLVVVLRQFDLTGDVPLWILALVLGFGAFCQQPEIQLW
LSGGNLHRRAGLRISLHIVNTTITMYLLGWGPLLAIAHLHILTVHLRQSGSRAWKPAAAA
SAGALLAGQVVVGLGLLPTNLSVAQSHGLALLVAIGTVTTARTLGKFVAQNERAEASVRH
NEERFRALVRDGSEVITMGDADGNITWVSPAAKPVMGYLPEELRGKVLSGLFHPEDDIAA
MELFTRLLASDSTVEHSAELRVRHADGSWHWHEIIARNMLAHPAVQAIVSHQRDITERRA
VQDRIAYAASHDGLTGLANGPTLNRDLERALAQGTRYQHPVAVLFCDLDGFKAVNDTYGH
DVGDRLLQTISGVIKRVTRDTDTAGRLGGDEFGVVLTRVRNAEEALSVAQRIVEGISTNA
SVAGLKLDVGCSIGVALAYPGGSDVKSLMRHADAAMYRSKRQGRNGCQLYVEEEVTAPWS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgctgctggccagaggcgcacggatcgcccggaacggcatggagcccctggtc
gtcctgacccttgtcgtcgtgctgcgccagttcgacctgaccggcgacgtcccgctgtgg
atcctcgcgctggtgctcggtttcggcgccttctgccagcagccggagattcagctctgg
ctctccggcgggaacctccaccggcgggccggcctgcgcatcagccttcacatcgtcaac
accaccatcacgatgtacctgctcggctggggacccctgctggcgatcgcccacctgcac
atcctcacggtgcacctgcggcagtccggctcccgggcctggaagcccgctgccgcggcc
agcgccggcgctctgctggccggtcaggtcgtcgtcggtctcggcctgctacccaccaac
ctgagcgtggcccagtcgcacgggctggcgctgctcgtcgcgatcggcactgtcaccacc
gcccggaccctcggcaagttcgtcgcccagaacgagcgggccgaggcgtcggtccggcac
aacgaggaacgcttccgggcgctggtccgcgacggctccgaggtcatcaccatgggtgac
gccgacggcaacatcacctgggtcagcccggcggccaagccggtgatgggttacctcccc
gaggagctgcgcggcaaggtgctcagcggcctgttccaccccgaggacgacatcgcggcg
atggagctcttcacgcgcctgctcgcctcggacagcaccgtcgagcactcggccgagctg
cgggtccggcacgccgacgggtcctggcactggcacgagatcatcgcccgcaacatgctg
gcccaccctgccgtccaggccatcgtcagccaccagcgcgacatcaccgagcgccgggcg
gtgcaggaccggatcgcgtacgcggcctcccacgacggcctcaccgggctggccaacggc
cccacgctgaaccgcgatctcgagcgtgccctcgcgcagggcacccgctaccagcacccg
gtggcggtgctcttctgcgacctcgacggcttcaaggccgtcaacgacacgtacggccac
gacgtcggtgaccgccttctgcagacgatcagcggtgtcatcaagcgggtcacccgggac
acggacaccgcggggcggctcggcggcgacgagttcggtgtggtcctgacccgcgtcagg
aacgccgaggaggcgctgagcgtggcccagcgcatcgtcgagggcatcagcaccaacgcc
tcggtcgccggcctgaagctggacgtcgggtgcagcatcggcgtggctctggcgtacccg
ggcggctccgacgtgaagtccctgatgcggcacgccgacgcggccatgtaccgctcgaag
cgccagggccgcaacggctgccagctctacgtcgaggaagaagtcaccgccccctggagc
tga
DBGET
integrated database retrieval system
