Actinoplanes friuliensis: AFR_20850
Help
Entry
AFR_20850 CDS
T02892
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
afs
Actinoplanes friuliensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_3
PAS_8
PAS_4
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AGZ42442
UniProt:
U5W085
LinkDB
All DBs
Position
4542703..4544913
Genome browser
AA seq
736 aa
AA seq
DB search
MHGADFDDHTADYWARQIRIGSAIAAGVTLLGCVRVAADWAPADRWLIPWALGAVVLQLA
ALALPWLRLARDVRIRRSLVLWLVAELPLLFQFARIDDDGLMFYLPGSALIIVATAALYP
PLVVVGLGVLALVGYLALLPAVTAGNAVSIVSLLAIMFCLVALTAINSRSRRRLDERRKA
AEHRTELLLEAASDAVFAIDVAGEIRYASPSAQRILGMGTDQLSGVALKTLAHPDELAGL
GAWMSDLWRVPGGTSRTEARLRRPDGTWMHLDVIGTNRLDDPSLRSAVISLRDIGRRKEL
EDQLSLQAFTDSLTGLPNRALFRDRLEQAARRPGSDVTVLLIDLDDFKLVNDNLGHNAGD
ELLATLAGRLRGEMRAGDTLARLGGDEFAILAEDLDAAEAAVLAERLLTAGREQVRLGSR
DVSCSLSIGIATGDLPAEQLLRNADLAMYAAKRSGRNAYQLFSPSMSRSVLEEAQQRVDM
ERGLEQEQFVVLYQPVVDMTTQRLTGVEALVRWRHPDDGLLSPYQFIANAEANGLIVPLG
RWVLREACAQLARWRRETPAAAGLKINVNLSARQFQYAGLVGDVAAALADAGIPASALTL
EITESMLMEDVTGAIETLGALRQLGVRLAIDDFGTGYSSLNYLKQLPVDIIKIDRTFVES
VDTDADDVALVDAVVGLGQALRLQTVAEGIETDGQWAMLQQIGCDQGQGYLFGRPGDAAS
VAALLARDAAAAPAGV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgcatggtgccgatttcgacgatcacaccgcggactactgggcccgtcagatccggatc
gggtccgcgatcgccgccggtgtcacgctgctcggctgcgtcagggtggcggccgactgg
gcgcccgcggatcgctggctgatcccgtgggcgctcggtgccgtcgtgctgcagctcgcc
gccctggcgctgccctggctccggctggcgcgcgacgtccggatccggcgctccctcgtc
ctctggctggtcgccgagctgccgctgctcttccagttcgcccggatcgacgacgacggg
ctgatgttctacctgcccggctcggcgctgatcatcgtggcgaccgcggcgctctacccg
ccgctggtcgtggtcggtctcggcgtgctggcgctggtgggctacctggccctgctgccc
gcggtcactgccgggaacgcggtctccatcgtcagcctgctggccatcatgttctgcctg
gtcgcgctgaccgcgatcaactcccggagccggcgccggctggacgagcggcgcaaggcc
gccgagcaccgcaccgagctgctgctggaagccgcctcggacgccgtcttcgcgatcgac
gtcgccggcgagatccgctacgccagcccgtccgcccagcgcatcctcggcatgggcacc
gaccagctcagcggcgtcgccctcaagaccctggcccaccccgacgagctcgccgggctg
ggcgcgtggatgagcgacctgtggcgggtgcccggcgggacctcccgcaccgaggcccgg
ctgcgccgccccgacggcacctggatgcacctcgacgtcatcggcaccaaccggctcgac
gacccgtccctgcgctccgccgtgatcagcctgcgggacatcggccggcgcaaggagctc
gaggaccagctcagcctgcaggcgttcaccgactcgctgaccgggctgcccaaccgggcg
ctgttccgcgaccgcctcgaacaggccgcccgccggcccggcagcgacgtcaccgtgctg
ctcatcgacctcgacgacttcaagctcgtgaacgacaacctcgggcacaacgccggcgac
gagctgctggccacgctggccggacggctgcgcggtgagatgcgcgccggtgacaccctg
gcccggctcggtggtgacgagttcgccatcctggccgaggacctcgacgccgcggaggct
gcggtgctcgccgaacggttactgaccgccggccgggagcaggtacgcctcggcagccgt
gacgtcagctgctccctcagcatcggcatcgccaccggtgacctgccggccgagcagctg
ctgcgcaacgccgacctcgccatgtacgcggccaaacgcagcgggcgcaacgcgtaccag
ctgttcagcccctcgatgtcacggtcggtcctggaggaggcgcagcagcgcgtcgacatg
gaacgcggcctggagcaggagcagttcgtcgtgctctaccagcccgtcgtggacatgacg
acgcagcggctgaccggtgtcgaggcgctcgtgcggtggcggcatcccgacgacgggctg
ctcagcccgtaccagttcatcgccaacgctgaggcgaacggcctgatcgtgccgctgggc
cggtgggtgttgcgcgaggcctgcgcgcagctggcgcgctggcggcgggagacgccggcc
gcggccggtctgaagatcaacgtcaacctctcggcgcggcagttccagtacgccggcctg
gtcggcgacgtcgcggcggcgctggccgacgcgggcatcccggcgtccgcgctgaccctc
gagatcaccgagtcgatgctgatggaggatgtcaccggcgcgatcgagaccctcggcgcc
ctgcggcagctcggcgtccgtctcgccatcgacgatttcggtacgggctactcgtccctc
aactacctcaagcaactgccggtcgacatcatcaagatcgaccgtacgttcgtggagagc
gtcgacacggacgccgacgacgtcgcgctggtcgacgcggtcgtgggtctcgggcaggcg
ctgcggctgcagaccgtggccgagggcatcgagacggacggtcagtgggcgatgctgcag
cagatcggctgcgaccagggccagggctacctcttcggccgcccgggtgacgcggcctcg
gtggccgcactgctcgcccgggacgcggcggcggccccggccggggtctga
DBGET
integrated database retrieval system
