Actinoplanes friuliensis: AFR_35055
Help
Entry
AFR_35055 CDS
T02892
Symbol
ligC
Name
(GenBank) ATP-dependent DNA ligase
Organism
afs
Actinoplanes friuliensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
LZ_Tnp_IS481
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AGZ45267
UniProt:
U5W8D4
LinkDB
All DBs
Position
7653702..7654769
Genome browser
AA seq
355 aa
AA seq
DB search
MDLPINPPVKPMLAKPVADIPPGQLYEPKWDGFRSIIFRDGDEVEIGSRNEKPMTRYFPE
VVQAVLANFPPRSVIDGEIIVADTARNTLDFEALQQRIHPAASRVKLLSEQTPAGFVAFD
LLALGDEDLTTLPFAERRARLEQCLADAKPPVYVTPATDELETAQRWFAEFEGAGLDGLI
AKAKDLEYVPDKRVMTKIKHKRTADCVVAGYRVHKSAENRIGSLLLGLFDERDVLVSVGV
IGSFPMAVREELFTEMQHLVTTFEGHPWNWAAHEQGERTPRKNEVSRWNNGKDLSFIPLR
PERVVEVRYDYMEGLRFRHTAQFERWRPDREPRSCTYEQLERPVRFNLADVLTSR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggacctgccgatcaacccgcccgtcaagccgatgctggccaagcccgtcgccgacatc
ccgccggggcagctctacgagcccaagtgggacggtttccggtcgatcatcttccgcgac
ggtgacgaggtggagatcggcagccgcaacgagaagccgatgacccgctatttccccgag
gtcgtgcaggccgtgctggcgaacttcccgccccggtcggtgatcgacggcgagatcatc
gtcgccgacacggcccgcaacaccctcgacttcgaggcgttgcagcagcgcatccacccc
gcggcgagccgggtcaagctgctttccgagcagacgccggccggttttgtggccttcgac
ctgctggcgctgggtgacgaggatctgaccacgctgcccttcgccgagcgccgcgcgcgc
ctcgagcagtgcctcgccgacgcgaagccgcccgtttacgtcaccccggccacggacgag
ctcgagaccgcccagcggtggttcgccgagttcgagggtgccggcctggacggcctcatc
gccaaggccaaggatctcgagtacgtgccggacaagcgcgtcatgaccaagatcaagcac
aagcggacggccgactgtgtcgttgcggggtaccgcgtgcacaagtcggcggagaaccgc
atcggctcgctgctgctgggcctcttcgacgagcgggacgtgctggtctcggtcggtgtc
atcggctcgttcccgatggcggtccgcgaggagctcttcacggagatgcagcacctggtc
accacgttcgaaggacacccgtggaactgggcggcgcacgagcagggcgagcgcaccccg
cgcaagaacgaggtcagccgctggaacaacggcaaggacctgtccttcatcccgctgcgg
ccggagcgtgtggtcgaggtgcgctacgactacatggagggcctgaggttccggcacacc
gcgcagttcgagcgctggcgtcccgaccgggagccgcgctcgtgcacctacgagcagctc
gagcggccggtccgcttcaacctcgcggacgtgctcacgagccgctga
DBGET
integrated database retrieval system
