Aythya fuligula (tufted duck): 116488599
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Entry
116488599 CDS
T07966
Symbol
PCM1
Name
(RefSeq) pericentriolar material 1 protein isoform X1
KO
K16537
pericentriolar material 1 protein
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116488599 (PCM1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aful03037
]
116488599 (PCM1)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
116488599 (PCM1)
Cilium and associated proteins [BR:
aful03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116488599 (PCM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCM1_C
Csd3_N2
Motif
Other DBs
NCBI-GeneID:
116488599
NCBI-ProteinID:
XP_032042149
UniProt:
A0A6J3CVJ3
LinkDB
All DBs
Position
4:18067250..18109181
Genome browser
AA seq
2034 aa
AA seq
DB search
MATGGGPFEEGMNEQDLPGWSNESLDDRLNNTDWGSQQKKANRSSEKNKKKLGGDTETRL
TNDISPESSPGMGRRKTRTPHSFPHARYMTQMSVPEQAELERLKQRINFSDLDQRSIGSD
SQGRATAANNKRQLNENKKPFNFLSLQINTNKSKGPASDSQKKESGIPLQCKELFEAALS
KDFLQNCQLSHQEDGRGEPAMDSSQIVSRLVQIRDYIAKASSMRDDLVEKNERSANVERL
SHLIDHLKEQEKSYLKFLQKMLARDPQQEAKEELENLKKQHDLLKRMLQQQEQLKALQGR
QAALLALQHKAEQAIAVMDDSVVTETTGSVSGVSLTSELNEELNDLIQRFHNQLHDSQTQ
SVPDNRRQAESLSLTREISQSRNSSVSEHLSDEKAQLFNKMRMLQGKKQKMDKLLGELHT
LRDQHLNNSSFFPASGSPQRSIDQRSTTSAASAPIGVVTVVNGESNSLASAPYPPDTLAS
QNESEEDDNLNPTEKLQKLNEVRKRLNELRELVHYYEQTSDMMTDAVNENTKEEEETEES
ESDSEHGDPQPVTNIRNPQGITSWSEINSNSNVQCGTNNRDGRHLNTDCEINNRSAANIR
TLKMSSALDCHNREDDKETDLPQGEDDEVEEDRASEDSIPSHRSSLGDAADAEFEQKINR
LIAAKQKLRQLQNLAAMVQDDDPEPQAPAANASNMGDLFLGEMEETKQQPNNVRASTNKM
QKDVGLNEKAREKFYEAKLQQQQQELKQLQEERRKLIEIQEKIQVLQKACPDLQLSAGLG
NCPANRQTSPAASTPAMNECNMAGKPLLDFDESVPVGNELWSEMRRHEILREELRRRRKQ
LEALMAEHQRKRELAETISTVAASVKSEGSEAQHTPQQSRTENRTMATWGGSTQCALDEE
DGDEDYLSDGLDQAEEEEEDASSSNDSFSVYPNNHVPENMYFLKENKDRWKNVRPFSADG
NYRPLSKTRQQQNVSMRRQENLRWMSEVSYVEEKEQWQEQINQLKKQLEFSVSICQTLMQ
DQQALSCLLQTLLTGPYSMMPNNVASSQVHLIMHQLNQCYTQLTWQQNNVQRLKQMLNDL
MRQQEQQQCQEKPSRKERGSSAPPPPSPVCCPFSFPPQPVNLFNIPGFTNFSPFVPGINY
VPVFPSGFGDCAHNGSPHSSEQQQHPVDHNASGKTEYMAFPKPFESSPSNGAEKTRSHRQ
PEEEVEKRSTWLNDSQEMKKDDPSHLKAGFPVSVQNVASGHKNQSDMSRRRDFEEESLES
FSSMPDPVDPTTVTKTFKSRKASAQASLASKDKTPKLKNKRKSSQLKGRIKNTGYESASA
SSVCEPCKSNKSKHSEEVVHAKVFSKRNREQLEKIIKYSRSTEMSSAHARRILQQSNRNA
CIEVPETGSDLSMFEALRDTIYSEVATLISQNESRPHFLIELFHELQLLNTDYLRQRALY
ALQDIVTRHLSENNEKGKCTKSLNSATWIASNSELTPSESLASTDDETFDKNFPTEACQD
CEPNDADNGSTMSTSSHFEPFATDDLGNTVIHLDQALARMREYERMKIEAESTLDSEGCS
SNFQGATAAKLEGPSTSECLSAPQSSEASAVPCPRIDTQQLDRQIKAIMKEVIPFLKEHM
DEVCSSQLLTSVRRMVLTLTQQNDESKEFVKFFHKQLGSILQDSLAKFAGRKLKDCGEDL
LVEISEVLFNELAFFKLMQDLDSNSISVKQRCKRKIETTEEIQSYAKEAKKGLQVDVCSS
AEDVDEDKDKDETETVKPAESSEMYDGNEVPESIKSDASDQEEDEESESAPVAISLSKAE
TQALTNYGSGEDENEDEEIEFEEGPVDVQTSLQASSETATETEQTPNQELNKTKGSDTMS
SKQESANVKGEQDEATLLPHYLNVMENTPPLTVNAPESFITASVKTEEMSSSLPGNETQK
LDTACVVNKSSAGSSESSMAGSPDTESPVLVNEYEAGSGNISQKSDEDDFVKVEDLPLKL
AVYSEADLMKKIASEAQTNSLSDELLDGGRAQEEELVGDAQTLKEPETVGVQSV
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggaggtggtccatttgaagaaggcatgaatgagcaggacttgcccggctgg
agcaatgagagccttgatgacaggctgaacaacacggactggggaagtcaacagaaaaaa
gcaaacagatcatcagaaaaaaacaagaagaagcttggtggagacacagaaacgaggctt
actaatgatatatctccagaatcttcacctggaatgggacgacggaagaccaggactcct
catagttttcctcatgcacgatacatgacccagatgtctgttccagagcaggctgaacta
gaaagacttaagcaaagaataaacttcagtgatctggatcagagaagcattggaagtgat
tctcaaggcagggcaacggctgctaacaacaaacgtcaacttaatgaaaacaaaaaacca
ttcaacttcttgtcactgcagataaacactaacaaaagcaaaggtcctgcatcagattcc
caaaaaaaagaaagcgggataccattgcaatgtaaagagttgtttgaagctgctctaagt
aaggatttcttgcagaattgtcaactctctcatcaagaagatggaagaggagaaccagct
atggatagcagccagattgtgagcagactagttcaaattcgcgactatattgctaaggcc
agctccatgcgggatgatcttgtagagaaaaatgaaagatcggccaatgttgagcgttta
tcacaccttatagatcaccttaaagagcaggagaaatcctatctgaaatttttgcaaaag
atgcttgccagagatcctcaacaggaagctaaggaggagctggaaaacttgaagaagcag
catgatttattgaaaaggatgctacaacagcaggaacaattgaaggctcttcaaggaaga
caagcagctcttcttgctttgcagcataaagcagagcaagcgattgctgtcatggatgat
tctgttgtaacagagactacaggtagtgtttcaggagtaagtctcacatcagaactgaat
gaagaattaaatgacttaattcaacgctttcataaccagctgcacgattctcagacacag
tctgtgccagacaatagaaggcaagcagaaagtctttcacttaccagagagatttcacaa
agccgaaactcctcagtgtcagaacacctgtcagatgagaaggcacagctttttaacaag
atgcggatgttgcagggtaaaaagcaaaaaatggataaactgttaggagaacttcacaca
cttcgtgaccaacatctaaataactcctctttttttcctgcttcaggttctcctcagagg
agtattgaccaaagaagtacaacttcagctgcttctgctcctataggagtggtaactgtt
gtcaatggtgaatcaaatagtctggcatctgctccctatcctcctgataccctggcttct
cagaacgagagtgaagaggatgacaacttaaatccaacagaaaagcttcagaagctaaat
gaggttcgtaagaggctgaatgaattgcgtgagttagttcactactacgaacaaacatct
gatatgatgacagatgctgtgaatgaaaacactaaggaagaggaagaaacagaagagtca
gaaagtgattctgaacatggggatccacagcctgttacaaatattagaaatcctcaagga
atcactagctggagtgaaataaatagcaactcaaacgtgcagtgtggaactaataacaga
gatggaagacatcttaatacagactgtgaaataaataaccgatctgctgctaatataagg
actctaaaaatgtcttctgctctagactgccataatagggaggatgacaaagagactgac
ctaccacaaggtgaagatgatgaagtggaagaagatagagctagtgaagattccatacct
agtcacagaagcagcctgggtgatgctgcagatgctgagtttgagcagaagattaatagg
ctcatagctgcaaagcagaaactcaggcagttacaaaaccttgctgctatggtgcaggat
gacgatccagaacctcaagcaccagctgcaaatgcatctaatatgggtgacttgtttttg
ggtgagatggaagagacaaagcaacaaccaaataatgtccgagctagtaccaataagatg
caaaaagacgtaggactgaatgaaaaagcaagggagaaattctatgaagctaaacttcag
cagcagcaacaggaacttaagcagttacaagaagaaagaagaaagctgatagaaattcaa
gaaaaaattcaagtgctacagaaagcttgtcctgaccttcaattgtcagctggcctgggt
aactgcccagcaaataggcaaacttcaccagcagcctcaactccagccatgaatgagtgc
aacatggctggcaagcctttacttgactttgatgaatctgtaccagttggcaatgagtta
tggtctgagatgagaagacatgagattctgagagaagagttgcgacggagaagaaagcaa
cttgaagctttaatggctgaacatcagaggaagagagagctggcagaaacaatatctact
gttgctgcctctgttaaaagtgagggatcagaagctcagcatactccacagcaaagcagg
acagaaaataggacaatggctacctggggaggctctacccagtgtgcactagatgaagag
gatggagatgaagattatctctctgatggacttgatcaggcagaggaggaggaagaagat
gcgtcaagttcgaatgacagtttctctgtttatcccaataaccacgtaccagaaaacatg
tattttcttaaagaaaacaaggataggtggaaaaatgtccgtcctttttcagcagatggg
aattaccgtccattgtctaaaaccaggcagcagcaaaatgtcagtatgcgacgtcaggag
aaccttcggtggatgtctgaagtttcttatgtggaagaaaaagaacaatggcaagaacag
atcaatcagttgaagaaacaacttgaatttagtgtcagcatttgtcagaccttgatgcag
gaccagcaggcactctcctgtcttctacagactttgcttacaggcccttacagtatgatg
cccaataatgttgcatcttcacaagtacatcttatcatgcatcagttaaaccagtgttat
actcagctgacttggcagcagaataatgttcagaggttgaaacaaatgttaaacgatctc
atgcgccagcaagaacaacaacagtgtcaagagaagccttcaagaaaggagagaggcagt
agtgcaccaccacctccatcacctgtttgctgtccgttcagctttcctccacagcctgtg
aacctgtttaacataccaggatttaccaatttttctccctttgttccaggtattaactac
gttccagtgtttccttctggatttggagactgtgcacacaatggttccccacacagcagt
gagcagcagcaacatcctgtagatcataatgcttctgggaaaactgagtatatggcgttc
cccaaaccttttgaaagtagtccctctaacggagcagaaaaaacaaggagtcacagacaa
cctgaagaggaagtggaaaaaagatcgacttggcttaatgatagccaagaaatgaaaaaa
gatgatccatctcacctgaaagcgggttttccagtttcagtacaaaacgttgcttctggt
cataaaaatcagtctgatatgagcaggagaagagactttgaggaggagtctttggaaagt
tttagtagcatgcctgatccagtagacccaactactgtgacaaagacatttaaatccaga
aaagcatcagcacaagcaagcttggcatcaaaagataaaacacccaaattgaagaataag
agaaagagttctcagctgaaaggcagaatcaaaaatactggttatgaaagtgcaagcgct
tctagtgtgtgtgaaccctgcaaaagcaataaaagcaaacactctgaagaggttgttcat
gcaaaggtgttcagcaaaaggaatcgggaacaattagaaaaaataattaaatacagtaga
tctacagaaatgtcttcagcacatgctaggagaattctgcagcagtctaacagaaatgca
tgcattgaagtgccagaaactggtagcgatctttctatgtttgaagctttgcgggacaca
atttattcagaagttgcaactcttatttctcaaaatgagtctcgtccccactttctaatt
gaacttttccatgagctacaactgttaaacacagattacctaagacaaagggctctatac
gctttacaggatatagtgacaagacatttatctgagaacaatgagaaaggcaaatgtaca
aaatcgctgaattccgcaacatggatagcatctaactctgaactcactcccagtgaaagc
cttgcttctacagatgatgaaacttttgacaagaacttccctacagaagcatgccaagac
tgtgaaccaaatgatgcagacaatgggagtactatgtctacatcttctcattttgaaccc
tttgccacagatgacctgggcaacacagtgattcacttagatcaagctttggctaggatg
agggaatatgagcgtatgaaaattgaagctgaaagtacccttgactctgagggctgctct
agtaattttcagggtgctactgctgctaaattagaaggtccaagcaccagtgaatgtctt
tctgcaccacagtcaagtgaagcttctgctgttccatgtcctcgcatagatactcagcag
cttgaccggcagattaaagccattatgaaagaggtcattccttttctgaaggaacacatg
gatgaagtatgctcttctcaattgctgacatcagtaagacgtatggtcttgactcttaca
caacagaatgatgaaagtaaagaatttgtgaagttctttcataagcaactcggcagtata
cttcaggattcactggcaaaatttgctggtagaaaactaaaagattgtggggaagatctt
cttgtggagatttctgaggtgttatttaatgaattagccttctttaaactcatgcaagac
ttggacagcaacagtatttctgtaaagcagaggtgtaaaagaaaaatagaaacaactgaa
gagatacagtcttatgctaaagaggcaaaaaaaggtctccaggtggatgtttgttcatct
gctgaagatgtcgatgaggacaaagacaaggatgagactgaaactgtgaaaccagcagag
agctcagaaatgtatgatggtaatgaagttcctgagagcattaagtctgatgcttctgac
caagaggaagatgaagaaagtgagagtgccccagtggctataagcttatcaaaagcagaa
acccaagctctgactaactatggcagtggagaagatgagaatgaagatgaagaaatagaa
tttgaggaaggacctgttgatgtgcagacatcactacaagctagcagtgaaacagcaact
gaaactgaacagactccaaaccaagaactgaataaaacaaaaggcagtgatactatgtca
tccaaacaagaatctgctaatgtaaaaggtgaacaagatgaagctacacttctgcctcat
tacctcaatgtcatggagaacacaccacctttaacagtcaacgccccagaatcatttata
acagccagtgtgaaaacagaagaaatgagctcatcgttaccagggaatgaaactcaaaag
ctagatacagcatgcgtggtaaacaagtcatctgctggaagttctgaaagctccatggct
ggcagtcctgatacagagtcacctgtattagtgaatgaatatgaagctggttctggaaat
ataagtcaaaaatctgatgaggatgactttgtgaaagttgaagacttgccccttaaactt
gcagtctattcagaggcagatttaatgaagaaaatagcatcggaggcccaaaccaacagt
ttgtctgacgagttactggatggaggtagagcccaagaggaagaactagtaggagatgcc
caaactttgaaagaaccagaaactgttggagttcaaagtgtgtga
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