KEGG   Aythya fuligula (tufted duck): 116494692
Entry
116494692         CDS       T07966                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116494692 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aful03021]
    116494692 (AFF4)
Transcription machinery [BR:aful03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     116494692 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 116494692
NCBI-ProteinID: XP_032052581
UniProt: A0A6J3DM90
LinkDB
Position
14:complement(18398392..18443659)
AA seq 1167 aa
MNREDRNVLRMKERERRNQEIQQGEEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMEDLLGDRSQQKLVGIPKPTVPSATDEKSNQSFFGDQRHNTSSHQSSKWTPVGPAPSTS
SQSQKRSSGLQSGHSSQRGSGNNTSSSGQRHDRDSYSSSSSRKKSQHGSEHSKSRSSSPG
KPPAVSSLSSSHSRSHGGDHHSKEHQRSKSPRDPDANWDSPSRVPSFSSGQHSNQSFPPS
LMSKSNSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHSSSVNELKPSSKAHLTKLKIP
SQPLDASASGDVSCVDEILKEMSHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGE
QKRYNPSSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEP
SQHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQ
LDNWLNKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYADQSGSKDSISSTPGRDS
KPTQKGSEGSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMA
TNIPSNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDS
DENESLPPSSQTPKYSESNRTPVKSSMEEDDSFFRHRMFSPMEEKELLSPLSDPDERYPL
IVKIDLSLLSRIPGKPYKDADAPKVEKKTVPEKHTRESQKQPSDKSSTKGKRKHKQNEDE
NRASESKKTKLEEKAPSGHKTSSSRESLKPSAVKEKDLLPSPAAPVLQKDSKQEHGSRKR
TVSQSSSLKSSSNVSKDSSGGSKSNSSSKQKKMEGKGSSSTKETKEKILNNSSNCPPVSA
PSTESSKSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECG
NALEKNAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQSLLYLRL
FKLKKESALKYSKTLTEHLKNSYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGA
ANPSGSGSSVTIPQRIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGP
LVFNSSIMTDLVRYTRQGLHWLRLDAK
NT seq 3504 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgtatgaaagaaagggaaaggcgaaatcaagaa
attcaacagggtgaagaagcctttccacctaactctcctctctttgcggaaccgtacaaa
gttaccagcaaagaagacaaattgtctagtcgcattcagagcatgctcggtaattatgac
gaaatggaggatcttctaggagatcgatcgcaacagaagctcgttggaattcccaaacca
accgtaccatcagcaacagatgagaaatcaaaccaaagtttctttggtgaccagagacat
aatactagttcacatcagagtagcaaatggactcctgtaggaccagcacctagcacttcc
tcgcaatctcagaaacggtcctcgggtttacagagcgggcacagcagtcagcgcggcagt
ggcaataacactagcagtagtggccagaggcatgaccgtgactcatacagtagcagcagc
agccgcaaaaaaagccagcatggatctgaacactccaaatcccgttcttccagccctgga
aaaccacctgctgtttcttcgttgagctccagccattcgagatctcatggaggcgatcat
cacagcaaagaacatcaacggtcaaaatctccccgggatccagatgccaactgggactct
ccctcccgcgtaccctcattttcaagtggacaacactctaatcagtcttttccaccctca
ctaatgtccaagtccaattcaatgttacagaaacccactgcctatgtaaggccgatggat
gggcaggaatccatggaaccaaagttatcttctgaacactacagtagccagactcacagc
agcagtgtgaatgagctgaagcccagcagcaaagcacatctaaccaagctgaaaatacct
tctcaaccactcgatgcatcagcatctggtgatgtgagctgtgtggatgaaattctaaaa
gagatgtcccattcttggcctcctccactgactgctattcatactccgtgcaaaactgaa
ccgtcaaaatttccttttccaacaaaggagtcccaacagtccagttttggcactggagaa
cagaaacgatataatccttcatcaaaaacatccaatggtcatcaatccaaatcatgtgaa
tcgaaccagacagatatgttgaaagatgacttaaagcttagcagtagtgaagacagcgat
ggagagcaggattgtgataagacagtgccaaggagcacacctggaagtaattctgaacct
tcgcagcataacagtgaaggagcagataattcaagggatgactcgagcagccatagtgga
tctgaaagcagttcaggatctgactccgaaagtgaaagcagttccagtgatagtgaagct
aatgaaccatcacagagcgcgtcccctgagccagagccaccgccaacaaacaagtggcag
ctggataactggttgaacaaagtaaattcacataaagtgtcaccagcttcttctgtggac
agcaatatcccgtcctcacaaggctacaaaaaagagggacgggatcaggggacaggcagt
gggtacgctgatcaaagcggatccaaggattcgatttcttctacaccagggcgagattcc
aaacccacccaaaagggctcagagggcagtcgtggcaggcagaaatcacctgcgcagagt
gacagctcaacacagaggaggactgtaggtaaaaagcagcccaagaaggcagaaaagaca
tctgttgaagagcctagaggaggtcttaaaatagaaagtgaaaccccagtagacatggca
acaaatataccttcaaacaggcataaggcagccacaaaaggttccagaaaacctaacata
aagaaagagcccaaatcttcccctcggcctacaacagagaagaagaaatacaaggcttcg
agcaaatctgcccagaaatccagggaattcatagaaacagatacctcatcctctgattca
gatgaaaatgaaagcctgcctccttcgtcacaaacacccaaatattctgagagcaatagg
actcctgttaaatcttccatggaggaggatgacagcttttttcggcatagaatgttctct
cctatggaagagaaagagcttctttcaccactcagtgatcctgatgaaaggtacccactt
attgtgaagattgacctgagcctcttatcaagaataccagggaagccttacaaggatgct
gacgcgcccaaagtggaaaagaaaaccgtaccagagaagcacacaagagaatcccagaag
cagccttctgacaaaagctctacaaaaggcaaaaggaaacataagcagaatgaggatgaa
aacagagccagtgaaagcaagaagacaaaactggaagagaaagctccatcaggacacaag
acgtctagcagtagagagtctctaaagccaagtgctgttaaagagaaggatttactgccg
tctcctgctgccccagtcctccagaaggattccaagcaggaacatgggtcccgaaagagg
acagtcagccagtcgtcatccttgaagtccagcagcaacgtcagtaaggacagtagtggt
ggcagtaaaagcaactcatcttctaaacagaagaagatggagggaaagggttctagcagt
actaaagaaaccaaggaaaagattctgaacaattcctcaaactgccctcctgtgtctgct
ccatctacagagagctcaaagtctagaagagcaaaacttgtttttgatgacaggacttac
tcagctgatcattatttacaggaagcaaagaagttaaagcataatgcggatgcactgtct
gacaggttcgagaaggctgtgtactacctagatgccgtagtgtcgttcattgagtgtggg
aatgcattggagaaaaatgctcaggaatccaagtccccgttccctatgtattcagaaact
gtggaattaatcaagtacactatgaaactgaaaaattacttggcaccggatgctacagct
gcagataaaaggctagcagtgctttgtcttcggtgccagtctctgctatacctaaggctt
ttcaaactgaaaaaggaaagtgcattgaaatattctaagactctgactgaacatctgaag
aattcctataacaattctcaagcaccatcacccggtatgggaagcaagcctgttggtatg
ccgtctccagtctctccaaagctgtctccagggaattcaggaaattactcttctggggca
gccaacccttcagggagcgggtcttcggtgacgatcccccagaggatccatcagatggca
gccagctacgtccaagttacatccaacttcctctatgccactgaaatatgggaccaagcc
gagcagctgtctaaagaacagaaagagttctttgctgaactggataaagtcatgggccct
ctggtttttaattcaagcatcatgacagacctagtgcgttatacccgtcagggactacat
tggttgcgcctggatgccaagtga

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