Aythya fuligula (tufted duck): 116495897
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Entry
116495897 CDS
T07966
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful04510
Focal adhesion
aful04512
ECM-receptor interaction
aful04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116495897 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116495897 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116495897 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aful00535
]
116495897 (COL9A3)
Proteoglycans [BR:
aful00535
]
Extracellular matrix (ECM) proteoglycans
Others
116495897 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116495897
NCBI-ProteinID:
XP_032054524
UniProt:
A0A6J3DUY4
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Position
16:13258881..13294537
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AA seq
675 aa
AA seq
DB search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NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattccccactcttgggctcctcgtcctttgtcagctattagccaccacctca
gctcagagagtaggaccacaaggccctcctggaccccgaggaccccctggaccatctggc
aaggacggcatagatggcgagccgggccctcctggtttgccaggcccaccagggccaaag
ggtgcaccaggaaagcctggagcagctggtgaagctggattgcctggccttcctggagta
gatggtttaacgggaactgatggcccacctggcccaaatgggcctctgggagaccgtggt
gcattaggacctgctgggccacctggacaagctggtaaaggactaccaggacctccaggg
cctccaggacccagtgggcttccaggtggaaatggatttcggggtcctcctggtccttat
ggccttccaggattcccagggcctcctggaccacccggacctcccggccttccaggcatc
tttcctgatggcggtggggacatccagtgcccagccctgtgcccaccgggtcctccaggt
cctccgggaatgccagggttcaagggacacactggtcacaaaggagaacctggtgagata
ggaaaagaaggagagaagggcaaccctggcccgccaggtcctccaggcattcctggcagt
gttggcctgcagggcccaagaggactaagaggcctccctggcccaatgggtccagctggt
gacaggggtgacattggattcagagggccacctggaatcccaggacctccagggaaagct
ggagaccaaggaaacaaaggacctcaaggattcagaggacccaaaggtgacactggtaga
cctggaccaaaaggaaacccaggggcacgtggactcataggagaacctggcatacctggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaaggggccaaacggacttcctggactgcctggaagagcaggtatt
aaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggcatccctggcgatgtcggtattcctggtgagagaggtctgccgggacccaga
ggagcaactggcccacttggtctccaaggcccgataggagctcctggtgtccgaggcttc
cagggtcctaaaggtgccagtggggaacctggccttcctggtccaactggaattcgggga
gagtttggtgacaggggccctaccggtgttactggtcccaaaggtaaccagggcattgct
ggagcagatggcctcccaggtgacaaaggagaactgggtccctatggtccccccggccaa
aaaggagagccaggaaaaagaggagaacttggtcccaaaggtgtccagggacctaacggg
acagctggagttccagggattccaggacacccagggcccatgggccatcagggggagcaa
ggcgttcctggcatcacgggaaaacctgggcctcctggcaaagaggccagtgaacaacat
ataagagaactctgcggggagatgataaatgatcaaattgcccagttagctgctaacctg
aggaagcccttgtctccaggaatgacgggtcggcctggcccggctgggccccccggtcct
cctggggctacgggaagcgttgggcatcccggtgctcgtgggcctcctggctacaggggg
ccaacaggagagctcggggatcctggtcccagaggtgacactggtgaaaagggagataaa
ggacccgttggacaaggtatcgatggacccgacggcgatcaaggacttcaaggacttcct
ggtgtacctggaattagtaaaaatggtcgtgacggtgctcagggtgaacccggtcttcca
ggggatcctggtactcctggtgctattggggctcagggaactccaggaatatgcgacaca
tcggcttgcatgggagctgttggagcatcaacttccaaaaaatcataa
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