Aythya fuligula (tufted duck): 116501526
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Entry
116501526 CDS
T07966
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116501526 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aful03021
]
116501526 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
aful03019
]
116501526 (SUPT5H)
Transcription machinery [BR:
aful03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116501526 (SUPT5H)
RNA polymerase I system
116501526 (SUPT5H)
Messenger RNA biogenesis [BR:
aful03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
116501526 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
116501526
NCBI-ProteinID:
XP_032063012
UniProt:
A0A6J3EMB0
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MSDSDDSNFSEEESERSSEAEEAEAEEERASAAGSEKEEAEEEEEEEEYDEEEEEEDDDR
PAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRL
QNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCK
IGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNL
RMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISL
KMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNR
YSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDN
VEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRF
EGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQ
TVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDG
PHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVAGFTPM
SPRITSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATES
TARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQ
TPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQG
YGGTPNPQTPGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQS
YHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGS
GIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHL
EPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgacgacagcaacttctcggaggaagagagcgagcgcagcagcgaggcc
gaggaggccgaggccgaggaggagcgcgccagtgcggctggcagcgagaaggaggaggca
gaggaggaggaggaggaagaggagtatgacgaggaggaggaggaggaagatgacgaccgg
ccggccaaaaaaccccgccacgggggcttcatcctggacgaggccgacgtcgacgacgag
tacgaggacgaggaccagtgggaggatggggccgaggacatcctggagaaagaagagatc
gaagcttccaacatcgacaacgtggtgctggacgaggaccgctcaggcgctcggcgcttg
cagaacctctggagggatcaacgggaggaggagctgggcgagtattacatgaagaaatac
gccaagtcctcggtgggagagaccgtttatggcggctccgatgagctctcggatgacatc
acgcagcagcagctgctgccgggagtcaaggatcccaacctctggactgtgaagtgcaag
attggtgaggagcgcgccacggccatcgctctgatgcggaaattcatcgcctaccagttc
accgacacgcccctgcagatcaagtcggtggtggcccccgagcacgtcaagggctacatc
tacgtggaggcctacaagcagacgcacgtcaagcaggcgatcgagggcgtgggcaacctg
cgcatgggctactggaaccagcagatggtgcccatcaaggagatgaccgacgtgctgaag
gtggtgaaggaggtcaccaacctcaagcccaaatcctgggtgcgcctcaagcgggggatc
tacaaggacgacatcgctcaggtggattacgtggagcccagccagaaccagatctccctc
aagatgattccccgcatcgatttcgaccgcatcaaagcccgtatgagcctgaaggattgg
tttgccaagcgcaagaagttcaagcgccccccccagcggctttttgatgctgagaagatc
cgctccctgggaggcgacgtggcctcggacggagacttcctcatcttcgaaggcaaccgc
tacagccgcaagggcttcctcttcaagagcttcgccatgtcggctgtgatcacggaaggc
gtgaagcccaccctgtcagagctggagaagttcgaggaccagcccgagggcatcgacttg
gaggtggtgacggagagcacagggaaggagcgcgagcacaacttccagcccggcgacaac
gtggaggtgtgcgagggtgagctgatcaacctgcagggcaaaatcctcagcgtcgacggc
aacaagatcactatcatgcccaaacacgaggacctgaaggacatgctggagttcccagct
caggagctgcgcaagtatttcaagatgggcgaccacgtgaaggtgatcgccgggcgcttc
gagggcgacacgggcctcatcgttcgggtggaggagaacttcgtcatcctcttctctgac
ctcaccatgcacgagctcaaggttctgccacgggacctgcagctctgctcggagacggcc
tcaggcgtggatgtcggggggcagcacgagtggggcgagctggtgcagctggacccccag
accgtgggggtcatcgtccgcctggagcgcgagaccttccaggtgctgaacatgtacggg
aaggtggtgactgtgcggcaccaggccgtcaccaggaagaaggacaaccgcttcgccgtc
gccctcgactcggagcagaacaacatccacgtcaaggacatcgtcaaagtcatcgatggg
ccccactcgggccgcgagggggagatccggcacctcttccgtggctttgccttcctgcac
tgcaagaagctggtggagaacggcggcatgttcgtctgcaagacccgacacctcgtcctg
gctggcggttccaagccgcgggatgtcaccaacttcaccgtggccggctttactcccatg
agcccccgtatcaccagcccgatgcaccccagtggggccggccaacgtggcggcttcggc
ggcggcggcatgagccgggggcgcgggcggcgggataacgacctcatcgggcagacggtg
cgcatctcccagggaccttacaaaggctacatcggggtggtgaaggacgccaccgagtcg
acggcccgcgtggagctgcactccacctgccagaccatctcggtggaccgccagcgcctc
accacggtcggctcgcggcgccccggtgggatgacatcgacctacgggcgcacccccatg
tacggttcccagacccccatgtatggctcgggctcccgcacccccatgtacggctcccag
acgcccctgcatgacggcagccgcaccccacactacggctcgcagaccccactgcacgat
ggcagccgcacgcccgcccagagcggcgcctgggaccccaacaaccccaacacgccttcc
agggctgacgaggactttgagtacggcttcgacgacgagcccacgccctcaccgcaaggc
tatggtggcacccccaacccgcagacccccggctaccccgacccctcatccccgcaggtc
acccagccctacaacccccagacacctggcacgccggctatgtacaacaccgaccagttc
tccccgtacgccgtgccatcgccgcagggctcctaccaacccagccccagcccccagagc
taccaccaggtggcccccagccccgtgggctaccaaaacacccactcgccagccagctac
caccctacgccatcgcctatggcctaccaggccagccccagccccagcccggtggggtac
agcccgatgaccccgggggcgccatccccggggggttacaacccccacacccctggttca
ggcatcgagcagagctccagtgactgggtgaccaccgacatccaggtgaaggtccgggac
acctacctggacagccaggcggtgggacagacgggcgtcatccgcagcgtcacggggggg
atgtgctccgtctacctgaaggacagcgagaaggtggtgagcatctccagcgagcacctg
gagcccgtcacccccaccaagagcaacaaggtgaaggtgatcctgggggaggaccgcgaa
gccaccggcatcctgctcagcatcgacggcgaggacggcatcgtccgcatggacctggac
gagcagctcaagatcctcaacctgcgcttcctgggcaagctcctggaggcctga
DBGET
integrated database retrieval system
