Anopheles funestus (African malaria mosquito): 125767840
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Entry
125767840 CDS
T09273
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
afun
Anopheles funestus (African malaria mosquito)
Pathway
afun03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
afun00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125767840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afun03021
]
125767840
03019 Messenger RNA biogenesis [BR:
afun03019
]
125767840
Transcription machinery [BR:
afun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125767840
RNA polymerase I system
125767840
Messenger RNA biogenesis [BR:
afun03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
125767840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
Motif
Other DBs
NCBI-GeneID:
125767840
NCBI-ProteinID:
XP_049290716
LinkDB
All DBs
Position
3:complement(33406247..33409934)
Genome browser
AA seq
1095 aa
AA seq
DB search
MSDSGSGSDADSVASNRSRKSGGSNRSVSRSVSRSPQRSRSPSTSQSDNERPRKKQRKDR
RRLDDEDDDDDEEEVEDEQEPEGEDLDSEEYDEEEEDEDDNRRGGRKKKKKSDRFGGFII
DEAEVDDEVDEDDEWEEGAQEMGIVSNEIEEVGQTAREIENRRRGTNLWDSHKEDELAEY
LKRKYADASVARRQFGDGGEEMSDEITQQTLLPGIKDPNLWMVKCRIGEEKATALLLMRK
FLTYQNTDQPMQIKSVVAPESVKGYIYIEAYKQAHVKSAINNVGNLRVGIWKQEMVPIKD
MTDILKVVKEQTGLKPKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRLRGA
LRATQTEESTDAKRKKRRPAAKSFDPEAIRAIGGELTSDGDFLIFEGNRYSRKGFLYKAF
TMSAVLADGVKPTLAELERFEEQPEEINIELAVSSKEDPVTGHSFSMGDNVEVCVGDLMN
LQAKIIAIDGSLITVMPKHEELRDPLIFKAAELRKYFKTGDHVKVLAGRYEGETGLIVRV
EPSRIVLVSDLTMHELEVLPRDLQICTDMATGVDSLGIYQWGDLVQLDAQTVGVIVRLER
ENFHVLGMHGKVIECKPTALQKRRENRNTIALDWDQNQIRRKDIVKVMEGPHTGRDGEIK
HLYRNLAFLHSRMYTENGGIFVVKTRHLQLAGGNKNPMQNSNPMMSPFGGIMSPRIHSPM
HPSGGRGGGGGGGGGPNRGGRGGGRGGARVSRDREILGRTIRITGGPYKGAVGIVKDATE
TTARVELHSSCQTISVDRNHITVVDGGATKAGSVSSYMRTPSRTPASSYGAQTPVYSGSK
TPLHGSQTPQYDPGSRTPYGSMTPSHDGSMTPRHGAWDPTVSNTPARSNDFDFMEEQSPS
PGYNPSTPGYQINTPYAPQTPGNMFNSENYSPYQASPNPSPSPYQVGGYIGTPSPSAYSP
ATPGAPASPYNPQTPGAGLDPQLGDWFTTDIEVTIRSHGDSDLSGQTGIIRTVNNGDCVV
FLPEEDHCVTVPLSNLQPVLPEPGEKFKVIVGEDRETVGEFIDMSGSNEALVMINGQSTL
IPMNYMARYREPTKN
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcggtagcggctcggatgctgacagtgtggcatcgaatcgttctcgcaaa
agtggtggctcgaatcgttcggtgtcccgatcggtatcgcgatcaccacagcgttcccgg
tcaccatcgacatcgcaatcggataacgagcggccaagaaagaaacagcgcaaggatcgg
cgccgtctggatgacgaagatgatgatgatgacgaggaagaggtagaggacgagcaggaa
ccagaaggggaggatcttgactcggaggagtacgacgaggaggaggaggatgaagacgat
aatcgacgcgggggccgcaagaagaagaagaagtcggatcgtttcggtggtttcatcatc
gacgaagcggaagtagacgatgaggtggacgaggatgacgagtgggaagaaggggcgcaa
gagatgggcatcgttagcaatgaaatcgaggaggtgggacagacggctcgcgaaatcgaa
aatcgacgccgcggaacgaatctgtgggattcgcacaaggaggatgaactggccgaatat
ctgaagcgcaagtatgcggatgcttccgtggcacggcgtcagttcggcgatggcggggag
gaaatgtcagacgagatcacgcaacaaacgttgctgcccggcatcaaagatccaaacctc
tggatggtgaaatgtcgcataggcgaggaaaaggcgaccgcgttgctgttgatgcgcaag
ttcctgacctatcagaacacggatcaaccgatgcagatcaagtcggtcgtggcgccggaa
agtgtgaagggttacatctacattgaagcatacaaacaggcgcacgttaaatcggcgatc
aataatgtcggtaatctgcgtgtcggcatctggaaacaggagatggttccgatcaaggat
atgacggatattctgaaggtggtcaaggagcagacgggactgaagccaaaacagtgggtg
cgacttaagcgtggcatctacaaggacgatatcgctcaggtagattatgtggatctggcc
caaaaccaggtccatctaaagctgcttccgcgcattgactatacgcggcttcggggtgcc
ctgcgcgctacacagaccgaagaaagtacggacgcgaagcgcaaaaagcgacgaccggcg
gccaaatcgttcgatcccgaagcgatccgtgcgatcggcggtgagctgacgtcggatgga
gatttcctgatcttcgaaggtaatcgctactcgcgcaaagggtttctttacaaagcgttc
accatgtcggccgtcctggccgacggtgtgaaaccgacgctagccgaactggaacgattc
gaggagcaaccggaagagattaacatcgagctggccgtttcctccaaggaagacccagtg
accgggcattccttctccatgggtgataatgtggaggtgtgcgtgggtgatctgatgaat
ctgcaggcgaagattatcgcgatcgatggttcgctcataacggtgatgccaaagcacgag
gagctacgcgatcccctcatcttcaaagcggccgaactgcgcaaatacttcaaaacgggt
gaccacgtgaaggtgcttgccggtcggtacgagggtgaaacgggattgattgtgcgcgta
gaaccgtcgcgcattgtgctcgtttccgatctgaccatgcacgagctggaggttttgccg
cgcgatctgcaaatctgcacggacatggcgactggagtggattcactcggcatctaccag
tggggtgatttagtacagctggacgcacagaccgtgggcgtgatcgtacgtttagagcgc
gagaatttccacgtgctgggcatgcacggcaaggtgatcgaatgtaaaccgacggcgctg
cagaaacggcgcgaaaatcgcaacacgatcgcgcttgactgggaccagaatcagatccgt
cgaaaggacatcgtgaaggtaatggaaggtccacataccgggcgcgatggagaaatcaaa
catctctatcgcaaccttgcgttcctgcactcgcgcatgtacacggagaatggtggcatt
tttgtggtcaaaacccgccatttgcagctagcgggagggaataaaaatccgatgcaaaac
agcaacccgatgatgtcaccgttcggtggcattatgtcgccccgcatccactcaccgatg
catccgtccggtgggcggggtggtggtggtggtggtggcggtggccctaatcggggtggt
cgtggtggtggacgcggtggtgcacgcgtttctcgcgaccgggaaatattgggccgcacc
atacgaatcaccggcggaccgtacaagggtgcggttggtattgtgaaggatgcaacggaa
acgacggcacgcgttgagctgcattcgtcctgccagacgatctcggtcgaccggaatcac
atcacggtggtggatggtggcgcaaccaaggcaggaagcgtttcgtcgtacatgcgcaca
ccgagccgtacgccggccagcagctacggtgcccaaacgccggtctactccggctcgaag
acaccgctgcacggttcgcagacaccgcagtacgatccgggcagccgtacaccgtacggt
tcgatgacaccgtcgcacgatggttcgatgacaccgcgccacggtgcttgggatccgacc
gtatcgaacacgccggcacgttccaatgatttcgacttcatggaggaacagtcaccgtcg
cccggttacaatccgagcacgcccgggtaccagatcaatacgccgtacgcaccgcaaacg
cccggcaatatgttcaactcggaaaattacagtccgtatcaggccagcccgaatccgagc
ccttcaccgtaccaggtcggtggctacatcggtacaccgtcaccgagcgcttactcaccg
gccacaccgggtgcaccggcttccccatacaacccgcaaacacccggtgctgggcttgat
ccacagctgggcgattggtttacgaccgacattgaggtaacgattcgaagccacggtgat
tcggatcttagcggccaaaccggtatcatccgtacggtgaacaatggcgattgtgttgtg
ttcctgccggaagaggaccactgcgtgactgtgccactgtcgaatctgcaacctgtactg
ccggaaccgggcgagaagtttaaggtgatcgttggcgaggatcgggaaacggtcggcgag
tttatcgacatgtccggcagcaacgaggcgttagtgatgattaacggtcaatcgacgctt
attccgatgaactatatggcccgttatcgggaaccgacgaaaaactaa
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