Aspergillus flavus: AFLA_011801
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Entry
AFLA_011801 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
afv
Aspergillus flavus
Pathway
afv03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
AFLA_011801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afv03400
]
AFLA_011801
Enzymes [BR:
afv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
AFLA_011801
DNA repair and recombination proteins [BR:
afv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
AFLA_011801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
KAF7621503
LinkDB
All DBs
AA seq
1023 aa
AA seq
DB search
MGFKFSYLCDLLSSLENNKILKATTEARAHDPDAQTVTRWFKQHGRRLRNKDTDQLAVLS
CMFPEKRTDRVYWLQDTSLARVIGRCLLLGSSRREELERWRVSGGIDLARCVENVMRQAE
NHIREGQEVTVEEIDDALNRVASRCRFSGPRVRRQRAAVDVDETLSPLYRRLSSRDAKWL
TRMILKNYSPVTLPRNLTLKSFHFLLPHFLLFQDDFEATLNMLVSEPISHFPPHPEPGLA
RDLGMIAMQHLSPVVGIKIGRPDYYKARSIKHCCQMIGRRRMSIERKYDGEYCQIHVDLS
KPSRSIQIFSKSGKDSTADRSGVHHVVRDSLRIGRPGCKFSRRCILEGELLVWSDRHGKI
MDFHKLRKFIARSGTFIGTENDSPPQPYEHSMIVFFDILLLDDDVCLKKPHRERRLLLKD
VVHVIEGRADISEQRIIDFSRSGSQSHLENIFAKGVAQRWEGFVLKGCEDPYFTIFPSQA
NGSMGRWIKLKKDYIPGLGDTVDLAIIGGKYDSRDAGGLKQIQRLLWTHFFIGCLLNKED
VLQSRSKPKFRVVDVINRHCMSPKNMQILNQFGEYTACGIDSGHGFDIEYGTGNIPGLGV
VFRTPFVVEMLGSGFEKPSGSRYYTLRFPRIMKIHWDRSFEDAASFSELQLLADDARAVP
SEELAQEETEWNKRLKLGNGSSEYIVDRSQSLTSSSGVTQSPVKVRLSNWSTSTPVDETC
LPNPNSSVKICSGRTPATAHIIPIYIDESMASMSPSDDSDMHGNFLTSNKNLSSHQGSRQ
QKNNSSTTNSTRSKQSKSTEFENSDITIHSDTTSTLTNSSTQDPKVIEKQTNPQKTTKSP
LTTLPIYFIHNNLSNPEQPISTLPLTVTPNLNILIKSLLSRSLKTQPRTTSALVILLLNP
TQTPLGQALLDLATNLHKRLQAPSHHPGHLQTGSIFLLDSSLLDLGTDVTDPSSCVRMTW
GDIGKKYFYACVSWRLKGGVETVPCTPLDGVPKEVVDQGVRVSVVFDRRVMGVLESVGGL
GDE
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcaaattttcttatttatgtgatttactttcctctctcgagaataacaagatt
ctgaaagctactactgaagcaagagcccatgatccagacgctcagacggtgacccggtgg
ttcaagcaacatggcagacggctccgcaataaagacaccgaccagttggccgtcctctcg
tgcatgttcccagagaagcggacagacagagtttactggctacaggatacatccctggca
agggtaataggacgttgtctacttctcgggtcatcccggcgggaagagctcgagcgatgg
cgcgtttccgggggcatagatctggcacgatgcgtggagaatgtcatgcgacaggccgaa
aaccacatccgcgaaggccaggaggtaaccgtcgaggagattgatgatgccttgaacaga
gttgcatctcggtgcagattttccgggccccgtgtgcgtagacaacgggctgcggttgat
gtagatgagacgctgtctcctctataccgacgattgagtagtagagatgcgaaatggctg
actcgcatgatactcaagaactattctcctgtgactttaccgcggaatctaacgctgaag
agctttcattttttgcttccgcattttctgctttttcaggatgattttgaggcgacgctg
aatatgctggtgtcggagcctattagtcactttccaccacatccagagccagggctggct
agggacttggggatgatagctatgcaacatttgagtccagtggttggcattaagatcggg
cgaccggactactacaaggctcggagtatcaagcactgctgtcagatgattggtcgccgt
cggatgagtatagagaggaagtacgatggtgaatactgtcaaatacacgttgatctctcg
aagccttctaggtctattcagatattctcgaaaagtggtaaggattctactgcagatagg
tcaggggtccatcacgttgtcagagattccttgagaataggaaggccggggtgcaaattc
tctcgtcggtgtattctggaaggtgagctacttgtttggagcgatcgacatggcaaaatt
atggatttccataagctacgcaagtttatcgcccgttctggcactttcattgggacggag
aatgattccccgccacaaccttatgagcattcgatgattgtgtttttcgatatcctcctc
cttgacgacgacgtttgcttgaaaaaaccacaccgagagcgacgattactattgaaagac
gtagtacatgtaatcgaaggccgcgcagacatctccgaacaacgaatcatagacttctcc
cggtctgggagtcagtcgcacctagaaaatatcttcgccaagggcgtcgctcagcgatgg
gaagggtttgtcttaaaaggctgcgaagacccctacttcaccatctttcccagccaagca
aatggctccatgggccgctggattaagcttaagaaagactacatcccaggtctaggtgat
acggtagaccttgcgatcatcggcggaaaatatgattctcgagacgccggtggcttaaag
cagatccaaaggttattatggacacatttcttcattggatgtcttctcaataaagaggat
gttttgcagtccagatctaagcctaaatttcgggtggtcgatgtgatcaatcgtcattgc
atgagcccgaagaacatgcagatcctcaatcagtttggggagtacactgcctgcggcatt
gattcagggcatgggttcgatatagagtacgggacgggcaacatccccggcctgggtgtt
gttttcaggactccttttgttgtcgagatgctaggtagcgggtttgagaaaccatcaggc
tccagatattatacgcttcgcttcccgagaatcatgaagattcattgggatagatcgttt
gaggatgcagcatcgttttcagagctacagcttctggctgacgatgcccgggcagtcccc
tcagaagagctggcgcaagaagaaactgaatggaataaacgtcttaagctggggaacggc
tcgtcggagtatatagtcgatcgatcccagagcttgactagctcttcaggagtgacccag
agtccagtgaaagtgcgtctatcaaactggtctacaagcacaccagtagatgagacatgt
ctaccaaatccaaacagctccgtgaaaatatgtagcggaagaaccccagcaaccgcacat
attatccctatctatattgacgagtcaatggcatcaatgtccccctctgatgattcagat
atgcatggcaatttcctgacaagcaacaaaaatctctcatcacaccaaggctcccgccaa
caaaagaacaattcctctaccaccaactccacgaggtccaagcaaagcaaatcaactgag
tttgagaacagcgatataacaatccactcagacacaacatctacactgactaattcttct
acacaagaccccaaagtcatcgaaaagcagacaaaccctcaaaagaccaccaaatcccca
ttaacaaccctcccaatatacttcatccacaacaacctatccaatccagaacaaccaata
agcacactccccctaaccgtgactccgaatctcaacatcctcatcaaatccctcctctca
agatcactcaagacacagccaagaaccacctcagccctagtcattctcctgctaaatccc
acgcaaacacccttaggccaagccctcctcgatctagccaccaaccttcacaaaaggctt
caagcgccctctcatcaccccggccatttacaaactgggagtatattcctcctcgattcg
tccctcctggacctgggcacagacgtgaccgatcctagctcctgtgtgcggatgacatgg
ggggatatcgggaagaagtatttttatgcttgtgtttcgtggcgcttgaagggtggggtt
gagacggttccttgtacgcctttagatggggttcctaaggaggttgtcgaccagggggtt
agggtttctgttgtatttgataggagggttatgggtgttttggagtcggttgggggttta
ggggatgagtga
DBGET
integrated database retrieval system
