Aspergillus flavus: AFLA_013935
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Entry
AFLA_013935 CDS
T01090
Name
(GenBank) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
afv
Aspergillus flavus
Pathway
afv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFLA_013935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afv03041
]
AFLA_013935
Enzymes [BR:
afv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AFLA_013935
Spliceosome [BR:
afv03041
]
Complex C
Other components
Step II factors
AFLA_013935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
AAA_30
T2SSE
AAA_19
nSTAND3
AAA_16
SRP54
Motif
Other DBs
NCBI-ProteinID:
KAF7626544
LinkDB
All DBs
AA seq
1229 aa
AA seq
DB search
MDDLQSLELFSLVSRITSELQNHLGINDKTLAEFVIDQHLKCGSFSKFKETLDEMGAEFP
QSLMESIDRLVLTMHPKYKTKKTDDADKAEGGDDMDVLDALEKKARVFKGLAVPDKAPQW
DEDDYTDRKNSDEGDAKADAMDDTFAMLEGLAGKAREEKGHTTGEDRSSRKRSRSPGYDD
YDRGRRRKDKYRSRSRSHSPRYRKRDDGVDEFGRTRSKYSSRDEHRDGRSERRQRRHDRS
QDDHFRKPPPVELDDAPILYKVYDGRVTGVKDFGAFVNLSGVKGKVDGLVHVSAMQEGAR
VNHPSDLVSRGQPVKVKVISIQGSRIGLSMKEVDQVTGLDLIPQRRLASGANMERLDGTS
ANDRYGNLSSDVPVIEDSNGRPMKNRKRLTSPERWEIRQLIASGVASAADYPDLDEEYHA
TLTGEGTFEEEEDIDIEVRDEEPPFLAGQTKMSLELSPIRVVKAPDGSMNRAAMAGTNLA
KERRDLRQQEAQDKAAEQAAGVDLNAQWQDPMAAPEDRKFAADLRTAQQPKPDDAVPEWK
RVTMGKNQSLGKRTSMSIKQQRESLPVFKFRKQLLDAVRDNQLLIVVGDTGSGKTTQLTQ
YLAEAGYGNNGIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETRIKY
MTDGMLQREVLLDPDLKRYSVIMLDEAHERTIATDVLFGLLKKTIKRRPDLRLIVTSATL
DAEKFSEYFNGCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPSGDILVFL
TGQEEIDTSCEILYERMKALGSSVPELVILPVYSALPSEMQSRIFEPAPPGGRKVIIATN
IAETSITIDNIYYVIDPGFVKQNAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCF
RLYTEAAYQSEMLPTTIPEIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEE
LYALSALDDEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEVLTIVAMLSIQSVFYR
PKEKQQQADQKKAKFHDPQGDHLTLLNVYNGWKNSKFNNAWCFENFIQARQIRRAQDVRQ
QLLGIMDRYHHRIVSCGRNTTKVRQALCTGFFRNAARKDPQEGYKTLVEGTPVYMHPSSA
LFGKPAEHVIYHTLVLTTKEYMHCTTAIEPKWLVEAAPTFFKVAPTDRLSKRKKAERIQP
LHNRFAGEDDWRLSAQRRQGRGGGGGTWG
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctccagtctctggagctcttttcgctcgtttcgcgaattacgagcgaactc
cagaaccacttgggtatcaatgacaagacattagcggagttcgtgattgaccagcatctg
aaatgcggttcattttcgaaattcaaggagaccctagacgagatgggcgcggagttccct
cagagtttgatggagagtattgaccgtctggtgctcactatgcacccgaaatataagacg
aagaagacggatgatgccgacaaagcggaagggggtgatgatatggacgtactcgatgca
ctcgaaaagaaggcgcgcgtattcaaaggtctagctgttccggacaaggcaccgcagtgg
gatgaggacgactacacggataggaaaaattcggacgaaggcgatgccaaggccgatgca
atggatgatacatttgcgatgcttgaagggctagcaggaaaggcccgagaagagaagggt
cacacgacaggcgaggaccggagtagcaggaaacggagcagaagccctggttacgatgac
tacgatcgtggacgtcggcgcaaggacaaatatcgttcccgatcgaggtcacatagcccc
cgttatcgtaagagagatgacggcgttgacgaattcggccgtacgcgaagcaagtattcc
agccgcgatgaacatcgcgatggtcgcagcgagcggcgccagcggcggcatgaccggagc
caggacgaccattttcggaaaccacccccagttgagctagatgatgccccgatactgtac
aaggtctacgatggacgtgtcactggtgtgaaggacttcggagccttcgtgaatctctca
ggcgtcaaaggcaaagtggatggcctggtacacgtttctgcaatgcaagaaggagcgcga
gtaaatcacccttcggatttggtctccagaggtcagccggtcaaagttaaggtcatcagt
atacaagggtctcgcattggactttcgatgaaggaagtcgaccaagtgactgggcttgat
cttattcctcaacgccgactggcatctggcgccaatatggaacgcctcgacgggacttca
gctaatgaccgatatggaaacttgagctcggacgtgcctgtcatcgaggattctaatgga
aggcctatgaaaaaccgaaagcgtttaacttcaccagagcggtgggaaattagacagctg
atcgcatccggtgttgcgtcagcggctgactaccccgatctcgacgaggaataccatgca
acactgacaggcgagggcacctttgaggaggaagaagatattgatattgaagtccgagat
gaggagccgcccttcttggctggtcaaactaagatgtccctggaattatctcctatcaga
gttgtcaaggcgccagatgggtctatgaacagagcagctatggcgggtacgaacttggct
aaagaacgaagagaccttcgtcaacaagaggctcaggataaggctgcggaacaagctgca
ggagttgatcttaatgcacaatggcaagatccaatggccgcgccagaagaccggaaattt
gcggctgatcttcgaacggcccaacaacctaaacccgatgacgctgtgcctgaatggaaa
agagttacaatgggcaagaatcaatctcttggcaagcgaacatcgatgtctattaagcaa
caacgcgaaagtctgccggttttcaagttccggaagcaacttcttgatgctgttcgtgac
aaccagttgttgattgttgttggagatactggttccggaaagaccacacaactgacacag
tacttagctgaggctggttatggaaataatggcattatcggatgtacccaaccaagacgt
gtggccgcaatgtcagtcgcaaaacgtgtagctgaagaagttggctgcaagctcggtgca
gaggttggatacacgattcgttttgaagactgcaccagccctgagacacgaatcaaatac
atgactgacggaatgcttcaaagagaagtccttctagacccagacttgaagaggtactca
gtcatcatgcttgatgaggcccacgagcggacaattgctacagacgtccttttcggattg
ctaaaaaagacaataaagcggagacctgatcttcgacttattgttacttcagctacgtta
gatgcagagaagttctccgagtatttcaacggttgccccattttctcgatccctggacgt
acattcccagtcgagattatgtattcaaaggagcctgagtctgactacctggatgcggct
ttaatcactgtcatgcagattcacttaacggagccttctggtgatattcttgtttttctg
acgggacaagaagaaattgatacctcatgtgagattttgtacgagcgaatgaaagcgttg
ggttcttctgtaccagagcttgttatccttcctgtctactctgctcttcccagtgagatg
cagagtaggatttttgaacctgcaccaccaggaggcaggaaggtaatcattgcaaccaat
attgccgaaacatccattaccatcgacaacatctactatgtcattgatcctggcttcgtg
aagcaaaatgcttacgatccgaaacttggtatggactccttggtggtcactcctatctcg
caagcgcaggccaagcaacgagccggtcgtgctggaagaacaggtccaggaaagtgtttt
cgtctgtataccgaagcagcctaccaatcggaaatgttgccaaccacaattcccgagatc
cagcgtcaaaatctttcacatactattcttatgcttaaagctatgggtatcaatgatctg
ctccactttgacttcatggaccctcctccgacaaacaccatgcttactgcgctggaggaa
ctttatgcattgtctgcactcgatgatgaaggccttctgactcgtttgggtaggaagatg
gcagacttccccatggaaccagcacttgccaaggtcctcattgcgtcagtcgacatggga
tgttccgaggaagtccttaccatcgttgccatgctctctatccaatcggtcttttataga
cctaaagaaaagcagcagcaggcagatcaaaagaaagccaagtttcacgacccacaaggc
gatcacttgaccctactaaatgtgtacaacggctggaagaattcaaagttcaacaatgct
tggtgtttcgagaacttcatacaggcgcgtcagatccgccgtgctcaagacgtgcgccag
cagcttcttggtatcatggaccggtaccatcaccgcatcgtctcatgtggaaggaacaca
actaaagtacgtcaagcactatgcaccgggttcttcagaaatgcagcgcgcaaggacccc
caagaaggatacaaaacacttgttgagggtacacccgtctatatgcaccccagttctgcg
ttgtttggcaagccggctgaacacgtcatttatcacacattggtccttacgacgaaggaa
tacatgcactgcactacagctattgagcctaaatggctggtcgaggcagctccgaccttc
ttcaaggtcgctcccactgaccgcctgtcgaagcgtaagaaggctgagcgtatccaaccc
ttgcacaatcgctttgcgggtgaggatgattggcgtctatccgcacagaggcgtcaaggt
agaggaggtggtggaggaacttggggttaa
DBGET
integrated database retrieval system
