KEGG   Anaeromyxobacter sp. Fw109-5: Anae109_0939Help
Entry
Anae109_0939      CDS       T00559                                 

Definition
(GenBank) DNA ligase D
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
afw  Anaeromyxobacter sp. Fw109-5
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:afw00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Anae109_0939
Enzymes [BR:afw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Anae109_0939
DNA repair and recombination proteins [BR:afw03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Anae109_0939
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
1065326..1067869
Genome map
AA seq 847 aa AA seqDB search
MPDRLERYRAKRDPERTPEPFGPAEAGARALDAPRLFVVQKHAARRLHWDFRLELGGTLR
SWAVPKGPSADPSDKRMAVEVEDHPIEYANFEGIIPAGNYGAGAVIVWDRGTWRPVGDPY
DGLARGKLVFQLSGHKLHGEWTLVRTRAAQGGKQQWLLLKHRGDAWAGPGRPFPEESVLS
GRLLEELAAGEGRAEAAVRAAEGLGAPRRALADADARPMLAETREGPFDAPGWLFELKYD
GYRLVARREGSRVSLRYRSGEDATALYPELAKALESWPLDAVLDGEVVVLGPDGRPSFQA
LQGRAQLARPADVARAALERPATYFVFDLLSLAGLDLRALPLVERKRLLAEVAPRLGPVR
LAEHVEARGEDLYREVRARGLEGIVAKRADAPYRAGRSAAWLKIRVERTGDFAIVGFTAP
AGARARFGALHLAVHDGEGLLYAGSVGTGFGERLLEELHARLAPRARKTPPCRGAVPRGR
GHTWVEPELVCEVRFREWTAEGLLRQPVFLRLREDKRPEEAVREVAPHEGPPPVPRPARA
ERRVEVTNGAKVWFPAEGITKAEVVDYYRAIAPFMLPYLRDRPVVLTRYPDGIDGKSFFQ
KDAPEWRPEWIRTVRIRSEEAERDLDHFLVDDADGLAWIANLGTIPLHVWASRAGALERP
DWCVVDLDPKEAPFEHVVRIARALHALCDDLGLPSYPKTTGQKGLHVLVPLGGQLTHAQS
RTLGELLARAVEGELPRLATTARALSARGGRVYLDFLQNGYGKTIAAPYAVRPRPGAPVS
TPLRWSEVTPRLDPARFTIRNVPARARRLRADPLLPVLSERPDLAAALERLRVRMGEGER
AAARRRS
NT seq 2544 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgaccgcctcgagcgatatcgcgccaagcgcgacccggaacggacgccggagccg
ttcggcccggccgaggcgggggcacgcgcgctcgacgccccgcgcctgttcgtggtccag
aagcacgccgcccgccgcctccactgggacttccggctcgagctgggcgggacgctgcgc
tcctgggccgtccccaaggggccctccgccgacccctccgacaagcggatggcggtggag
gtggaggaccaccccatcgagtacgcgaacttcgaggggatcatccccgcggggaactac
ggcgccggcgcggtgatcgtctgggatcgcgggacctggcggccggtcggcgatccgtac
gacgggctggcgcgcggcaagctcgtcttccagctctccggccacaagctgcacggcgag
tggacgctcgtccgcacgcgcgcggcgcagggcggcaagcagcagtggctgctcctgaag
caccgcggcgacgcgtgggccggcccgggccggcccttcccggaggagtcggtgctctcc
ggccggctgctcgaggagctcgccgccggcgagggacgcgccgaggccgcggtgcgcgcg
gcggaggggctcggggccccgcggcgagcgctggcggacgcggacgcccgccccatgctc
gcggagacgcgcgaggggccgttcgacgcgccggggtggctgttcgagctcaagtacgac
gggtaccggctcgtcgcgcgtcgcgagggctcgcgcgtctcgctgcgctaccggagcggc
gaggacgcgacggcgctctacccggagctcgcgaaggcgctcgagtcctggcccctcgac
gccgtcctcgacggcgaggtggtcgtgctcgggcccgacggccgcccgtccttccaggcc
ctccagggccgcgcgcagctcgcgcgcccggcggacgtggcgcgcgccgcgctcgagcgt
cccgccacctacttcgtcttcgatctcctctcgctcgccggcctcgacctccgcgcgctc
ccgctggtggagcgcaagcgcctcctcgcggaggtcgcgccgcggctcggacccgtccgc
ctcgccgagcacgtcgaggcgcgcggcgaggacctctaccgcgaggtgcgcgcccgcggg
ctcgaggggatcgtggcgaagcgggcggacgcgccctaccgcgccggccgctccgccgcg
tggctcaagatccgggtcgagcgcacgggcgacttcgcgatcgtcggcttcaccgcgccg
gccggcgcccgcgctcgcttcggcgcgctgcacctcgccgtgcacgacggcgaggggctc
ctgtacgcgggcagcgtcgggacggggttcggcgagcggctgctcgaggagctccacgcg
cgcctcgcgccgcgcgcacgaaagacgcctccctgccgcggggcggtcccgcgcgggcgc
gggcacacctgggtcgagccggagctcgtgtgcgaggtgcgcttcagggagtggacggcg
gagggcctcctccggcagccggtgttcctgaggctgcgcgaggacaagcggccggaggag
gccgtgcgcgaggtcgcgccgcacgagggcccgccgccggtgccgcgcccggcgcgcgcc
gagcggcgcgtggaggtgacgaacggcgccaaggtgtggttcccggcggagggcatcacc
aaggccgaggtggtggactactaccgcgcgatcgcgcccttcatgctgccgtacctgagg
gaccggcccgtcgtgctgacgcgctaccccgacggcatcgacgggaagagcttcttccag
aaggacgcgccggagtggcggcccgagtggatccgcacggtgcgcatccgcagcgaggag
gcggagcgcgacctcgaccacttcctcgtcgacgacgccgacggcctcgcgtggatcgcg
aacctggggaccatccccctgcacgtgtgggcgagccgcgccggcgcgctcgagcggccg
gactggtgcgtcgtggatctcgatccgaaggaggcgccgttcgagcacgtggtgcgcatc
gcgcgggcgctgcacgcgctgtgcgacgacctcgggctgccctcgtacccgaagaccacg
gggcagaagggcctgcacgtgctcgtccccctcggcggccagctcacccacgcgcagtcc
cggacgctcggcgagctcctcgcccgcgcggtggagggggagctgccgcggctcgccacc
accgcgcgcgctctctccgcccgcggcggccgcgtctacctcgacttcctgcagaacggg
tacggcaagacgatcgccgcgccgtacgcggtccgccccaggccgggcgcgcccgtctcc
acgccgctgcgctggagcgaggtgacgcccaggctcgatcccgcgcgcttcaccatccgg
aacgtcccggcgcgcgcgaggcggctgcgcgccgacccgctgctgcccgtcctgtcggag
cggcccgacctcgccgccgcgctcgagcgcctgagggtgcgcatgggcgagggggagcgc
gccgcggcgcggcggcgctcgtag

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