KEGG   Anaeromyxobacter sp. Fw109-5: Anae109_4301Help
Entry
Anae109_4301      CDS       T00559                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
afw  Anaeromyxobacter sp. Fw109-5
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:afw00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Anae109_4301
   03410 Base excision repair
    Anae109_4301
   03420 Nucleotide excision repair
    Anae109_4301
   03430 Mismatch repair
    Anae109_4301
Enzymes [BR:afw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Anae109_4301
    6.5.1.6  DNA ligase (ATP or NAD+)
     Anae109_4301
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Anae109_4301
DNA replication proteins [BR:afw03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Anae109_4301
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Anae109_4301
DNA repair and recombination proteins [BR:afw03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Anae109_4301
   NER (nucleotide excision repair)
    Other NER factors
     Anae109_4301
   MMR (mismatch exicision repair)
    Other MMR factors
     Anae109_4301
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(5041919..5043478)
Genome map
AA seq 519 aa AA seqDB search
MQLAELVQTSDVVARTAGRLEKIARLADALRGLAPEERLAGASWLAGELRQGRIGLGPAA
VRAALEATAPADAPALAVREVDASLDRLAAARGAGSGRERAALLAALLARASADERDFLA
RLVLGELRQGALEGVLVEAVARAAAVPAGEVRRAVMMAGALPPVAEAALAEGAAGLSRFR
LRLLEPVQPMLAQPAAGVDEALAALGEAALEWKLDGARVQVHKDGGEVRVFSRALRDVTP
AVPEVVEAVRRLPASSLVLDGEAIALRGDGAPEPFQVTMRRFGRKLDVAGLREGVPLSVL
FFDALHTAGEDLIARPASERHLALAAAVPDALRVPRLVTSDGAAAAAFLEGALARGHEGL
LAKSLTAPYEAGRRGASWLKVKRAHTLDLVVLAAEWGSGRREGFLSNLHLGARDPEGGGF
VMLGKTFKGMTDAMLAWQTERFRALALGSTDGYVVHLRPELVVEVAFDGLQESSRYPGGL
ALRFARVKRYREDKRPEEADTIATVRALHARQVAAERGT
NT seq 1560 nt NT seq  +upstreamnt  +downstreamnt
gtgcagctcgccgagctcgtccagacctccgacgtcgtcgcgcgcaccgccgggcggctg
gagaagatcgcgcggctcgccgacgccttgcgggggctcgcgcccgaggagcggctcgcc
ggggcgagctggctcgccggcgagctgcgccagggcaggatcggcctcgggcccgccgcg
gtgcgggcggcgctggaggcgaccgccccggcggacgcgcccgcgctcgcggtgcgcgag
gtggacgcctcgctcgaccgcctcgccgcggcgcgtggcgcgggctccggacgcgagcgg
gcggcgctgctcgcggcgctgctcgcccgcgcctcggcggacgagcgcgacttcctcgcg
cggctcgtgctcggggagctccgccagggcgccctcgagggcgtgctcgtcgaggcggtg
gcgcgcgcggcggccgtcccggcgggggaggttcgccgcgccgtgatgatggccggcgcg
ctccccccggtggcggaggcggcgctcgccgagggcgcggcgggcctctcccgcttccgg
ctgcggctgctggagccggtgcagccgatgctcgcgcagccggcggccggcgtggacgag
gcgctcgccgcgctcggcgaggccgcgctggagtggaagctcgacggcgcccgcgttcag
gtccacaaggacggcggcgaggtgcgggtgttctcgcgcgcgctccgggacgtgacgccg
gccgtcccggaggtggtcgaggccgtccggcgcctgcccgcgtcctcgctggtgctggac
ggagaggccatcgcgctgcgcggggacggcgctcccgagccgttccaggtgacgatgcgc
cgcttcggccgcaagctcgacgtggcgggcctgcgcgagggggtgccgctctcggtgctg
ttcttcgacgcgctccacacggccggggaggatctcatcgcgcggcccgcctccgagcgc
cacctcgcgctcgccgccgcggtccccgacgcgctccgcgtgccccggctcgtcacctcc
gacggcgccgccgcggcggccttcctcgagggcgcgctcgcgcgcggccacgaggggctc
ctcgcgaagtcgctcacggcgccctacgaggcgggccggcgcggggcgagctggctcaag
gtgaagcgcgcgcacaccctggacctcgtggtgctcgccgcggagtgggggagcggccgc
cgcgaggggttcctgtcgaacctgcacctcggcgcccgcgatccggaggggggcgggttc
gtcatgctcggcaagacgttcaagggcatgaccgacgcgatgctcgcctggcagaccgag
cgcttccgcgcgctcgcgctcggctcgaccgacggctacgtcgtgcacctccggccggag
ctcgtggtggaggtcgccttcgacggcctccaggagagctcgcgctatccaggcggcctc
gcgctgcggttcgcgcgggtgaagcgttaccgcgaggacaagcggccggaggaggcggac
accatcgcgacggtgcgggcgctgcacgctcgtcaggtggcggcggagcgcgggacgtga

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