Anaeromyxobacter sp. Fw109-5: Anae109_4312
Help
Entry
Anae109_4312 CDS
T00559
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
afw
Anaeromyxobacter sp. Fw109-5
Pathway
afw02020
Two-component system
afw02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Anae109_4312
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Anae109_4312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afw03021
]
Anae109_4312
Transcription machinery [BR:
afw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Anae109_4312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
YutD-like
Motif
Other DBs
NCBI-ProteinID:
ABS28490
UniProt:
A7HIE4
LinkDB
All DBs
Position
complement(5052433..5053938)
Genome browser
AA seq
501 aa
AA seq
DB search
MSLELKQHLKMTQQLVMTPQLQQAIKLLQLSRMELVDLIRTELTENPLLEDPAEGEEESR
AEGASPTEQAQLEAEPQHKEAEKAEEVKGEEGANEIDWDQYLDHYQLQGHTAPSNRGLTD
EELPGYEATLTKKTDLVDHLVWQLRLSHLTEDEERVAMLIIGNLDEDGYFKMPPVEGESE
ESATRDPLVRVSFEAAVGIEFAEGVLKKVQALDPVGIASRDLRECLLNQVRHLNADTPEI
VAIIERHLRHLESKNYGAIAKDLKITVEEVVKAVKVISRLEPKPGRAYSGEEAQYITPDV
YVHKMGDKYVTVLNDDGLSKLRISGMYRAALKNGQAGEAKEYIQDKLRSAVWLIRSIHQR
QRTIYKVTESIVKFQREFLDKGIAYLKPLILRDVAEDIGMHESTVSRVTTNKYVHTPQGI
YELKFFFNSAINRTGGDEIASEAVKNHIKQIVAAEDPKHPHSDQRIVEILKGQGIEIARR
TVAKYREVLGILPSSKRKKYF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgagctgaagcagcacctcaagatgacccagcagctggtgatgaccccccag
ctgcagcaggccatcaagctcttgcagctctcgcgcatggagctcgtggacctcatccgc
accgagctcaccgagaaccccctcctcgaggatccggccgagggcgaggaggagtcgcgc
gccgagggcgcgagcccgacggagcaggcgcagctcgaggcggagccgcagcacaaggag
gcggagaaggccgaggaggtgaagggcgaggagggcgcgaacgagatcgactgggaccag
tacctcgaccactaccagctccagggacacaccgccccctcgaaccgcggcctcaccgac
gaggagctgccggggtacgaggcgacgctcaccaagaagacggatctcgtcgatcacctc
gtctggcagctccgcctctcgcacctcaccgaggacgaggagcgcgtcgcgatgctcatc
atcgggaacctcgacgaggacggctacttcaagatgccgccggtcgagggcgagagcgag
gagtcggccacgcgcgatcccctcgtccgggtgtccttcgaggcggccgtgggcatcgag
ttcgccgaaggcgtgctgaagaaggtccaggcgctcgatccggtggggatcgcgtcgcgc
gacctgcgcgagtgcctgctgaaccaggtgcgccacctgaacgcggacacgcccgagatc
gtggcgatcatcgagcggcacctgcggcacctcgagtcgaagaactacggggccatcgcc
aaggatctcaagatcaccgtcgaggaggtcgtgaaggcggtgaaggtgatcagccgcctg
gagccgaagcccggccgcgcctactcgggcgaggaggcgcagtacatcacccccgacgtc
tacgtccacaagatgggggacaagtacgtcacggtcctcaacgacgacgggctctcgaag
ctgcgcatcagcgggatgtaccgcgcggccctcaagaacgggcaggccggcgaggcgaag
gagtacatccaggacaagctccgcagcgcggtgtggctcatccgctccatccaccagcgg
cagcgcacgatctacaaggtcaccgagtcgatcgtgaagttccagcgcgagttcctcgac
aagggcatcgcctacctgaagcccctcatcctccgcgacgtggcggaggacatcggcatg
cacgagtccacggtgtcgcgcgtcacgacgaacaagtacgtgcacacgccgcagggcatc
tacgagctcaagttcttcttcaactcggccatcaaccggacgggcggggacgagatcgcc
agcgaggcggtcaagaaccacatcaagcagatcgtcgccgccgaggacccgaagcacccg
cactccgaccagcggatcgtcgagatcctcaagggccaggggatcgagatcgcgcgccgc
accgtcgcgaagtaccgcgaggtgctggggatcctcccctcctcgaagcgcaagaagtat
ttctag
DBGET
integrated database retrieval system
