Antechinus flavipes (yellow-footed antechinus): 127538170
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Entry
127538170 CDS
T08818
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
afz
Antechinus flavipes (yellow-footed antechinus)
Brite
KEGG Orthology (KO) [BR:
afz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afz01001
]
127538170
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afz04121
]
127538170
Enzymes [BR:
afz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127538170
Protein kinases [BR:
afz01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
127538170
Ubiquitin system [BR:
afz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127538170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
127538170
NCBI-ProteinID:
XP_051817733
LinkDB
All DBs
Position
5:complement(104531231..104649179)
Genome browser
AA seq
1080 aa
AA seq
DB search
MEVAVEKAAAAAAAAAAAAVAAGAPAAAVPSGENEAESRQGPDSERGGEAARLNLLDTCA
VCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPLLGAAETPPPPAAAAAAAPGSPI
SATPPYSTQGTNFSGLGHRRVRRKRTNPEKIGVIRCPVCSQECAERHIIDNFFVKDTTEV
PSSTVEKSNQVCTSCEDNAEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPE
AVGVTSQRPVFCPYHKKEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIID
TLITKLMEKTKYIKFTGNQIQNRIIEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQL
ESLAKDHRMKLMQQQQEVAGLSKQLEHVMHFSKWAVSSGSSTALLYSKRLITYRLRHLLR
ARCDASPVTNNTIQFHCDPSFWAQNIFNLGSLVIEDKESQPHMPKQSPVVEQNSQPPGGL
SSNQLSKFPTQISLAQLRLQHMQQQVMAQRQQVQRRPAPVGLPNPRMQGPIQQPSISHQQ
PPPRLINFQNHNPKPNGPVLPPHPPQLRYPPNQNIPRQAIKPNPLQMAFLAQQAIKQWQI
SSGPASTVPSTASSTTSTPSSPTITSAAGYDTKSFGPPMIDLSSPVGSSYNLPSLPDIDC
SSTIALDNLVRKDASVEQNQPRPPSNRTVQSPNSSVPSPGLPGPVTMTSVHPPIRSPSAS
SVGSRGSSGSSSKPTGADSTHKVPVVMLEPIRIKQENSGPHENYDFPIVVVKQETDEEPR
SQNTNFPRSILTSLLLDSNHNATSEEAVLRTDAPDSTGDRPGLQASPSNAKSGWGGASQK
SPLHGGESRKDDDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLMNFPSGEWICTFC
RDLSKPEVEYDCDDPNYSSEKRKSEGHVGLTPIDQRKCERLLLFLYCHEMSLAFQDPVPS
TVPDYYKIIKNPMDLSTIKKKLQVDSPVYTKPEDFVADFRLIFENCAEFNEPDSEVASAG
IKLESYFEDLLKNLYPEKKFPKQEFKNETEDTIFSDDSDDDFVQPRKKRLKSIDDRQLFK
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtggagaaagcggctgcggcagcggcagcggcggcggctgctgcggta
gcggctggggccccggcggccgcggtccccagtggggagaatgaggccgagagtcggcag
ggcccggactcggagcgcggcggggaggcggcccgcctcaacctgttggacacttgcgcc
gtctgtcaccagaacatccagagccgggcgcccaagctgctgccctgcctgcactcgttc
tgccagcgctgcttgcccgccccccagcgctacctcatgctgcccgccccgctcctgggg
gccgccgagacgcccccccctcccgccgccgccgcagccgctgcccccggttcccccatc
tctgccacccctccatacagcacccaagggactaactttagcgggcttggacacaggaga
gtgagaagaaaaagaactaatcctgaaaaaattggagtcattcgttgtccggtatgcagc
caggaatgtgcagagagacacattatagataatttttttgtaaaagatactacagaggtt
cccagcagtacagtagaaaagtctaatcaggtttgcacgagctgtgaagataacgcagaa
gcaaatggtttttgtgtagagtgtgttgaatggctctgcaaaacctgtatccgagctcat
cagagagtaaaattcacaaaagaccacactgtcagacagaaagaggaagtatctccagaa
gctgttggtgtgacgagtcagcgaccagtgttttgcccttatcataaaaaggagcagctg
aaactctattgtgagacctgtgacaaactgacatgcagagactgccagttgttggaacat
aaagaacataggtatcagttcattgaagaagcttttcagaatcaaaaagtgattatagat
acattaattactaagctaatggaaaaaacaaaatatataaagtttactggaaatcagatt
caaaacagaataattgaagtaaatcaaaatcaaaagcaggtggaacaggatattaaagtt
gctatatttactttgatggtagaaataaacaaaaaagggaaagctctcctgcatcagtta
gagagtcttgcaaaggaccaccgcatgaaacttatgcagcagcagcaagaagtggcagga
ctttcgaaacagttggaacatgtcatgcatttttccaaatgggcagtttcaagtggcagt
agcacagcactactctacagcaagcgtctgatcacgtatcgattacggcatcttcttcga
gccagatgtgatgcttcacccgtgactaataacaccattcaatttcactgtgatcctagc
ttttgggctcaaaatattttcaatttaggttctttagtaatcgaggataaagagagccag
ccacatatgcctaagcagagtcctgtggtggaacagaattcacagccaccaggtggctta
tcttcaaaccaattatccaagtttccaacacagatcagcctagctcaattacgactccaa
cacatgcagcaacaggtaatggctcagagacagcaggtgcaacggaggccagcacctgtg
gggttaccaaaccctagaatgcaggggcccatccagcagccttccatctctcatcagcag
ccccctccacgcttgataaattttcaaaatcacaaccccaaacccaacggaccagttctc
cctcctcatcctcctcaattgagatatcctcccaaccagaatataccacggcaagcaata
aaacccaatccactacagatggcatttttggcccagcaagccataaaacagtggcagatt
agcagtggaccagcatcaactgttccttctactgccagtagcaccacatctactccttct
agtcctactattactagtgcagctggatatgacaccaagtcttttggaccacctatgatt
gatcttagttctccagttggaagttcctataatcttccttctcttccagatattgactgt
tcaagtactattgcactggataatcttgtgagaaaagatgctagtgtagaacagaaccaa
ccacgacctccttcaaacagaacagtccagtcaccaaattcatctgtaccatccccaggt
ctcccaggacctgtaactatgactagtgtacacccaccaattcgctcacctagtgcctcc
agtgttggaagtagaggaagctctggctcttccagcaaaccaacaggagctgattctaca
cacaaagtcccagtggttatgttggaaccaatcagaatcaagcaggaaaatagtggccca
catgagaattatgatttccctattgttgtagtaaagcaagaaacagatgaagaacctaga
tctcaaaataccaactttcccagaagcatacttacatcattgctcttggacagtaatcat
aatgccacatctgaggaagctgttttaagaacagatgctccagatagcacaggagataga
ccaggacttcaggcaagtccttcaaatgcaaagtctggatggggaggtgcttcacagaag
tcaccccttcatggtggagaaagtagaaaagatgatgaccccaatgaagactggtgtgct
gtgtgtcagaatggaggagaactcctttgctgtgagaaatgccccaaagtgttccatctt
acttgtcatgtgcctacattgatgaatttcccaagtggagagtggatttgtactttttgt
cgagacttatccaaaccagaagttgaatatgattgcgatgatcccaattacagctctgaa
aaacgaaagtctgaaggacatgtaggattaacaccaatagatcaaaggaagtgtgaacga
ctacttttgttcctttactgccatgaaatgagcttggcttttcaagatccagttccttct
acagtgcctgattattacaaaataattaaaaatcctatggacttgtctaccatcaagaag
aaactccaggtagattccccagtatataccaagcctgaagattttgtagctgatttccgg
ctgatttttgaaaattgtgctgaattcaatgagcctgattctgaagtagccagtgctggt
ataaaacttgaaagctattttgaagacctcctgaaaaacctttatccagagaaaaaattt
ccaaagcaagaattcaagaatgaaacagaagataccatatttagtgatgattcagatgat
gactttgtacagccacggaaaaagcgtctcaaaagcattgatgaccgccaactgtttaaa
taa
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