Anoplophora glabripennis (Asian longhorned beetle): 108907817
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Entry
108907817 CDS
T07402
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
agb
Anoplophora glabripennis (Asian longhorned beetle)
Pathway
agb03022
Basal transcription factors
agb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108907817
09124 Replication and repair
03420 Nucleotide excision repair
108907817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agb03021
]
108907817
03400 DNA repair and recombination proteins [BR:
agb03400
]
108907817
Transcription machinery [BR:
agb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108907817
DNA repair and recombination proteins [BR:
agb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108907817
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
108907817
NCBI-ProteinID:
XP_018567144
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MADNGLGSSSHESTLIKQTNLECKNLYDYLKTRSPNVLEKLYNHPTICLAVYRELPELAR
QYVIRILFVEQPVPQAVVASWGSQAFSKEHVYVSKVLSELSVWQEAAIPGGLLGWILSST
FKRNLKVALLGGGKPWSMSSALEADSKARDVTFLDAYSLERWECVLHYMVGSQQQEGISA
DAVRILLHANLMKRDEEDGSPVITRQGFQFLLLDRQAQVWHFLLQYLDTVEERGLDLVEC
LTFLFQLSFSTLGKDYSTEGMSPGLLIFLQHLREFGLVYQRKRKAGRFYPTRLALNITCS
QSKGAADLEEDAPKGYIIVETNYRVYAYTDSNLQVALIGLFTDLMYRFPNLVVGVITRES
VRQAFRGGITADQIIGYLKQHAHPQMLQAENKQPLPPTVVDQIKLWEMERNRLTYNEGVL
YSQFLSQADFNVLKEYAQSNGSLIWCNKEKRTLVINKYAHDDVKKFWKRYSKGN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcagataatggtttaggttcttccagccacgagagtactttaatcaaacaaaccaat
ttagagtgtaaaaacctttacgattacctaaagacccgatcgccgaatgtacttgagaaa
ctgtacaatcaccccactatatgtttagctgtgtatagagaattacctgaattagcccga
caatatgttataaggatactttttgtagaacaacctgttccacaagccgtcgtagcctcc
tggggttcgcaagctttttccaaagaacacgtgtatgtaagtaaagtactgagtgagctc
tcggtatggcaggaggctgctattcccggcggtcttttaggttggatactctcatcgacg
tttaaaagaaacctcaaagtggcactacttggagggggtaaaccatggagtatgtcgtct
gcgttagaggcagatagtaaagcgagagatgtaactttcttagacgcttattccttggag
aggtgggaatgtgttctgcattatatggtggggtcgcagcagcaggaagggatttccgca
gatgctgtgagaattttgctacacgcgaaccttatgaaacgcgatgaggaagatggcagc
cctgtgataaccagacaaggattccaatttttattgttagatcggcaggcgcaagtctgg
catttcttgctacagtacctggatacggtcgaggagcgaggcttagatctggtggaatgt
ttgacgtttctattccaacttagttttagtacgttaggaaaggattacagtactgaaggt
atgagtcccggtttactgattttcctacagcacctcagagaatttggcttggtgtaccag
agaaagcgcaaagcgggccggttctacccgacgcgcttggcgctcaacatcacctgcagc
caaagcaagggcgcggccgacttagaggaggacgcccccaaggggtacatcatcgtcgaa
acgaattacagggtctacgcctatacagattccaatttgcaggtggccttgataggcctc
ttcaccgacctcatgtacagatttccgaatttagtggtaggcgtcataacccgggagtcg
gtgagacaggctttccgagggggcatcaccgcggaccagataataggctacctcaagcaa
cacgctcacccccagatgctgcaggccgagaacaagcaaccactgccgcccaccgtcgtc
gatcaaatcaaactgtgggagatggagaggaacaggctcacttacaacgagggggttttg
tacagtcagtttttgtcgcaggccgattttaacgttctgaaagagtacgctcagtccaac
ggttcgttaatatggtgcaacaaggaaaaaaggacgttagtcataaacaaatacgcgcac
gacgacgtgaagaaattttggaaaaggtattcgaaggggaattag
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