Accipiter gentilis (Northern goshawk): 126052423
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Entry
126052423 CDS
T08649
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
agen
Accipiter gentilis (Northern goshawk)
Pathway
agen03320
PPAR signaling pathway
agen04148
Efferocytosis
agen04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
126052423
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
126052423
03320 PPAR signaling pathway
126052423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agen03000
]
126052423
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
agen03310
]
126052423
Transcription factors [BR:
agen03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
126052423
Nuclear receptors [BR:
agen03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
126052423
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
DUF6021
tRNA_bind_3
CRT10
Motif
Other DBs
NCBI-GeneID:
126052423
NCBI-ProteinID:
XP_049689006
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All DBs
Position
29:17252683..17372457
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AA seq
467 aa
AA seq
DB search
MDTKHFLPLDFSNQVNSTSLNSPTSRGPMATPSLHPSIGPGIGSSLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPSTPSLGFGTSSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGTMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctgccactggatttctccaaccaagtcaattccacgtccctg
aactctcccacgagccgggggcccatggccaccccatccctccacccgtccatcgggccg
ggcatcggctcctcgctgggctccccgggccagctccactcgcccatcagcaccctgagc
tcgcccatcaatggcatgggacctccgttctccgtcatcagctcgcccatgggcccgcac
tcaatgtccgtcccctccacccccagcctgggattcggcaccagcagcccacagctcaac
tcacccatgaaccccgtcagcagctcagaagacattaagccacccctggggctcaacgga
gtcctcaaagtgccagcacatccctcaggaacgatggcctccttcaccaagcacatatgt
gccatctgcggggacagatcttcaggtaaacattatggggtttacagctgcgagggctgc
aaaggcttcttcaagcgcacggtgcggaaagacctcacctacacttgccgcgacaacaag
gactgcttgatcgacaagcgccagcgcaaccgctgccagtactgccgctatcagaagtgt
cttgcgatggggatgaagcgagaagccgtccaggaggagaggcagcggggaaaggaccgc
aacgagaacgaggtggagtcgacaagtagcgctaacgaggacatgcccgtggaaaagatc
ttggaagctgaactcgcagtggagccaaagacagagacgtacattgaagcgaatatgggc
ttgacgccgagctcgcccaacgacccagtgacgaacatatgccaggcggcagacaaacag
ctcttcaccctggtggagtgggccaagaggatcccccacttctccgagctgcccctggac
gaccaggtcatcttgctcagagcagggtggaacgagcttctcatcgcctccttctcccac
cggtccatagccgtgaaagacgggatcctcttagccaccgggctccacgtgcatcggaac
agcgcgcacagtgccggtgtcggggccatcttcgacagagtactgacagaactcgtctca
aaaatgcgagacatgcagatggacaagacagagctaggctgcctgcgagccattgtcctc
ttcaaccccgactcgaaaggtctctccaacccggctgaagtggaggcgttacgggagaag
gtgtacgcgtcgctagaggcgtactgcaaacacaaataccccgaccagcccgggaggttc
gcaaagctcttgctccgtctcccagccctccggtccattggcctgaaatgcctggagcac
ctcttcttcttcaagctaataggcgacacaccaatcgacaccttcttgatggaaatgctg
gaagcgccccatcaaatgacttag
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