Aphidius gifuensis: 122850857
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Entry
122850857 CDS
T07796
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
agif
Aphidius gifuensis
Brite
KEGG Orthology (KO) [BR:
agif00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
agif01009
]
122850857
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agif03019
]
122850857
Protein phosphatases and associated proteins [BR:
agif01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122850857
Messenger RNA biogenesis [BR:
agif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122850857
mRNA cycle factors
Stress granule specific factors
122850857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
SSP160
Motif
Other DBs
NCBI-GeneID:
122850857
NCBI-ProteinID:
XP_044005852
LinkDB
All DBs
Position
LG1:complement(19583496..19588664)
Genome browser
AA seq
801 aa
AA seq
DB search
MMLRHQHHTIQNQLRDQNRIANSTRQMSQSNMIPAHQAHMHLHRGIHGPQQIISMSHQPM
HHMQNSGPRQPMMITQNPQNPNGTMLNVGLNRQGDGSQTVIQYQQQVPPQQHQQQQQIQN
QNHQPSKTLNESPINLNKRQLRDQSPSNKNHGNSTNINNIDLTNMKEKTPMCLVNELARF
NKIQHQYRLTNEQGPAHKKRFTVTLKLGEEEYVADGASIKKAQHSAATEALSKTWYRQPP
PKPRGMRINSSGKSSTTSGNYTSHLPPTVELNALAMKRGESTIYTFKQAPSNQQLFIPQN
FGNLPNHQRSFTPNYQQVRSMNSYPKNDGLYLVTLTVGEREFIGKGVTAQAARHDAASRA
LEQLRQLPLPEDTTTTTSTTTTTTTTATTCVSAENGSSTCSSGIDEQNSELKSPVSLVHE
TALKRGLSVSFEVVSETGKPHIRTFSTKCIVGDTITIGEGSSKKVSKKKSAELMLEKVKK
LPPVTITVQNKTIRLKRKPPATKKKSRNLIKDYQEPKSIADTSDSVNPISRLVQIQQSKR
EKEPIYTLLEEKGAPRKREFLMEVSIGQYSATGIGPNKKMGKRAAAEALLTQLGYSKPQI
QPTKPAIKTKTTDNDNSTNTSGESKPRKVTFLNDEKTSEESQSQSHGGSLGRQLVPGLLL
VDGGQDSKISSGPSVQAVAEELREQQQTSPPGISPKEQLTYLAQLLNFQVEFSDFPKGVH
KEFLSLVSLNTHPPQVCHGHGPTTSASRDQAARTALRTLSKLGLDSVTSTQNNKQEKNDA
SDAIHINTQTKTNMLNQAIDK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcggcatcagcatcacactattcaaaatcaactacgagatcaaaacagaatt
gccaactcgacacgacaaatgtcacagtcaaacatgataccagctcaccaggcacatatg
catcttcatcgtggtatacatggaccacagcaaataatatcaatgagccatcaaccaatg
catcatatgcaaaattctggtcctcgtcagcctatgatgatcactcaaaatccacaaaat
ccaaatggcacaatgttaaacgttggtttgaatcgacaaggagatggcagtcagactgtt
attcaatatcaacagcaagtaccacctcaacaacaccaacaacaacaacaaattcaaaat
caaaatcaccaaccaagcaaaacattaaatgaatctcctattaatcttaataaacgtcaa
ttaagggatcaaagtccgtccaataaaaatcatggaaattcaacaaatataaataatatt
gatttaacaaatatgaaagaaaaaacaccaatgtgtttagttaatgaattggcacgtttt
aataaaattcaacatcaatataggttaacaaacgaacaaggaccagctcataaaaaacgt
tttactgtaacgttaaaacttggtgaagaagaatatgttgctgatggtgcaagtataaaa
aaagcacaacacagtgcagcaacagaagcacttagtaaaacatggtacagacaaccaccg
ccaaaaccacgtggtatgcgtattaattcatcaggtaaatcatcaacaacatctggtaat
tatactagtcatttaccaccaactgttgaattgaatgctcttgcaatgaaacgtggtgaa
tcaacaatttatacatttaaacaagcaccatcaaatcaacaattatttataccacaaaat
ttcggtaatttaccaaatcatcaaagatcatttacaccaaattatcaacaagttagatca
atgaatagttatccaaaaaatgatggattatatttagttacattgactgttggtgaacgt
gaatttattggtaaaggtgttacagcacaagcagcaagacacgatgcagcaagtcgggcc
cttgaacagctacgtcaactaccattacctgaagatacaacaacaacaacgtcaacaaca
acaacaacgacaacaacagcaacaacatgtgtatcagctgaaaatggctcatcaacatgt
agttctggtattgatgaacaaaattcagaactcaaaagtccagtatcacttgtacatgaa
acagcattaaaacgtggtttatcagtgagttttgaagttgtatcagaaactggaaaacct
catattcgtacattttcaacaaaatgtattgtcggtgatactattacaattggtgagggt
tcatcaaaaaaagtatcaaaaaaaaaatcagctgaattaatgcttgaaaaagttaaaaaa
ttaccaccagttacaataacagtacaaaataaaacaatacgtttgaaacgtaaaccacca
gcaactaaaaaaaaatcaagaaatttaataaaagattatcaagaaccaaagtctatagct
gatacatcagatagtgttaatccaatatcacggttagttcaaatacaacaatctaaaaga
gaaaaagaaccaatttatacattacttgaagaaaaaggtgcaccacgtaaacgtgaattt
ttaatggaagtatcaattggacagtattcagcaactggaattggaccaaataaaaaaatg
ggtaaaagggcagctgctgaagcattattaacacaacttggatatagtaaacctcaaata
caaccaactaaaccagcaattaaaacaaaaacaacagataatgataattcaacgaataca
agtggggaaagtaaaccaagaaaagttacatttttgaacgatgagaaaacgagtgaagag
tcacaatctcaatcacatggaggatcattaggacgtcaattagttcctggtcttcttctc
gttgatggaggtcaagatagtaaaattagcagtggaccaagtgttcaagcagtagccgag
gaactcagagaacaacaacagactagtccaccgggtatatcaccaaaagaacaattaaca
tatcttgctcaactattgaattttcaagttgaatttagcgattttccaaagggtgtgcac
aaggaatttttatcattggtttcactcaatactcatccacctcaagtttgtcatggacat
ggaccaacaaccagtgcaagtcgtgatcaagcagcacgaacagcacttcgtacactgagc
aaacttggccttgatagtgttacaagtacacaaaataataaacaagaaaaaaatgatgcg
tctgatgccattcacatcaatactcaaacaaagacaaatatgcttaatcaagcaattgat
aaataa
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