Agromyces badenianii: DCE93_06435
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Entry
DCE93_06435 CDS
T05411
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
agm
Agromyces badenianii
Pathway
agm03030
DNA replication
agm03430
Mismatch repair
agm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DCE93_06435
03430 Mismatch repair
DCE93_06435
03440 Homologous recombination
DCE93_06435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agm03032
]
DCE93_06435
03400 DNA repair and recombination proteins [BR:
agm03400
]
DCE93_06435
Enzymes [BR:
agm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DCE93_06435
DNA replication proteins [BR:
agm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DCE93_06435
DNA repair and recombination proteins [BR:
agm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DCE93_06435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AWB95337
UniProt:
A0A2S0WVI7
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All DBs
Position
1346242..1349775
Genome browser
AA seq
1177 aa
AA seq
DB search
MRSPVAADSFAHLHVHSEYSMLDGAARVGELIQAAKSEGMPAVAITDHGNVFGAYDFWKQ
ATDAGIKPIIGTEAYITPGTARGDKTRVRWGNGGGDDVSGSGAYTHMTLLSETTEGMHNL
FRLSSRASIEGYYFKPRMDRELLSMYSKGLIATTGCPSGEVQTRLRLGQYDEAVKAASDF
RDIFGKENYFAEIMDHGLGIERRIMEDLHRLAKDLGLPLVATNDLHYTHAADAKSHAALL
CVQSGSTLDDPNRFKFDADEFYLKTAAEMRHVFRDYPEACDNTLLIAERADVQFNTNANY
MPRFPVPEGESEDTWFVKEVDRGLEVRYPNGIPADVRKQADYEVGVILQMGFPGYFLVVA
DFINWSKNNGIRVGPGRGSGAGSMAAYAMRITDLDPLQHGLIFERFLNPDRVSMPDFDVD
FDERRRGEVIRYVTEKYGDERVAQIVTYGTIKAKQALKDSGRVLGFPFSMGEKLTKAMPP
AVMGKDIPLTGIFDTKHPRYKEASDIRAIVETDPEAKTVFETALGLENLKRQWGVHAAGV
IMSSDPLVDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIEAN
RGHRPVLEDLALDDQGAYDLLARGDTLGVFQLDGGPMRSLLRQMKPDNFEDISAVIALYR
PGPMGANSHINYALRKNGLQEITPIHPEFAESLREILDTSYGLIIYQEQVMAIAQKVAGF
SLGQADILRRAMGKKKKSELDKQYEGFSGGMKANGYSDAAIQKLWEILLPFSDYAFNKAH
SAAYGVLSYWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRRMGIKVLPPDVNESI
GYFAAVGEDIRFGLGAVRNVGFNVVDAIRSARETKGRFESFHDFLKKSPLSVANKRTIES
LVKAGAFDSLGHTRRSLVEIHEGAVESIVKEKRAEEVGDFGFDFDSLFDDDERDAAPSPV
PARPEWPKKQKLAFERDMLGLYVSDHPLAGLEAPLAKHASTTITELMTSDSTQDADTVTV
AGLVTSVQHRIAKASGNQYGMITVEDFSGEITVMFMGKAYQEFAPGLQADSIVVVRGRVS
MRDDGMNLHAYSVFTPEIGQDEESGIVKITLPDQRATQETTEALRDVLVRHRGETEVRIT
LTKGRVGRVFEVGQYPVTVTADLYGELKSLLGPNCLV
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgaggagccccgtggccgccgattccttcgcccatctgcatgtgcacagcgagtactcg
atgctcgacggtgcagcccgggtgggggaactcatccaggcggcgaagagcgagggcatg
cccgccgttgcgatcaccgaccacggcaacgtgttcggtgcgtacgacttctggaagcag
gcgaccgacgccggcatcaagccgatcatcggcaccgaggcctacatcactcccggcacg
gcccgcggcgacaagacgcgggtgcgctggggcaacggcggcggagacgacgtctcgggc
tcgggcgcctacacccacatgacgctgctctccgagacgaccgagggcatgcacaacctg
ttccgcctctcgagccgcgcctcgatcgagggctactacttcaagccgcgcatggaccgc
gagctgctgtcgatgtactcgaagggactcatcgcgacgacgggctgcccgtcgggcgaa
gtgcagacccgcctccggctcggacagtacgacgaagcggtgaaggcggcatccgacttc
cgcgacatcttcggcaaggagaattacttcgccgagatcatggaccacggcctcggcatc
gagcgccgcatcatggaggacctgcatcggctcgcgaaagatctgggcctcccgctcgtg
gccacgaacgacctgcactacacgcacgccgccgacgccaagagccacgcggccctgctc
tgcgtgcagtcgggctcgacgctcgacgaccccaaccgcttcaagttcgacgccgacgag
ttctacctgaagaccgcggcagagatgcggcacgtcttccgcgactaccccgaggcctgc
gacaacacgctgctgatcgccgagcgcgcagacgtgcagttcaacacgaacgccaactac
atgccgcgcttcccggtgcccgagggtgagagcgaagacacctggttcgtcaaagaggtc
gaccgcggtctcgaggtgcgctacccgaacggcatcccggccgacgtgcgcaagcaggcc
gactacgaggtcggcgtcatcctgcagatgggcttccccggctacttcctcgtggtcgcc
gacttcatcaactggtcgaagaacaacggcatccgggtcggtccggggcgtggttccggt
gccggttcgatggcggcctacgccatgcgcatcaccgacctcgacccgctgcagcacggc
ctcatcttcgagcggttcctgaaccccgaccgcgtctcgatgcccgacttcgacgtcgac
ttcgacgagcgtcgacgcggcgaggtcatcaggtacgtgaccgagaagtacggcgacgag
cgcgtcgcgcagatcgtcacgtacggcacgatcaaggccaagcaggcgctcaaggactcg
ggccgcgtgctcggcttcccattctcgatgggcgagaagctcacgaaggcgatgccgccc
gcggtcatgggcaaggacatcccgctcaccggcatcttcgacacgaagcacccgcggtac
aaagaggcctctgacatccgggccatcgtcgagaccgatcccgaggcgaagaccgtcttc
gagacggcgctcgggctcgagaacctgaagcgccagtggggcgtgcacgctgccggcgtg
atcatgtcgagtgatccgctcgtcgacatcatcccgatcatgaagcgcgagcaagacggt
cagatcgtcacgcagttcgactacccggcgtgcgagtcgctcggtctcatcaagatggac
ttcctggggctgcgcaacctcaccatcatcgacgacgccctcgacaacatcgaggccaac
cgtggccaccgtccagtgctcgaggacctcgcgctcgacgaccagggcgcctacgacctg
ctcgcgagaggcgacaccctcggcgtcttccagctcgacggcgggccgatgcgatcactg
ctgcgccagatgaagcccgacaacttcgaagacatctcggccgtcatcgcgctgtaccga
ccggggccgatgggcgcgaattcccacatcaactacgcgctgcgcaagaacggcctgcag
gagatcaccccgatccaccccgagttcgcggagtcgctccgggagatcctcgacacgagc
tacggcctgatcatctatcaggagcaggtcatggcgatcgcacagaaggtcgccgggttc
tcgctcggccaagccgacatcctgcgccgcgcgatgggcaagaagaagaagtccgagctc
gacaagcagtacgagggcttctcaggaggcatgaaggccaacggctactcggatgccgcg
atccagaagctgtgggagatcctgctcccgttctcggactacgcgttcaacaaggcgcac
tcggccgcctacggcgtgctgagctactggactgcgtatctgaaggcgcactacccggcc
gagtacatggctgcgctgctcacgagtgtcggcgacgcgcgtgacaagctcgcgctctac
ctcaacgagtgccggcgcatgggcatcaaggtgctgccgcccgacgtgaacgaatcgatc
ggctacttcgccgccgtcggcgaagacatacggttcggactcggcgcggtccgcaacgtc
gggttcaacgtggtcgacgcgatccgcagcgcacgcgagacgaagggccggttcgagtcc
ttccacgacttcctgaagaagtcgccgctctcggtggcgaacaagcgcacgatcgagtcc
ctcgtgaaggcgggcgcgttcgactcgctcggacacacgcgtcgctcgctcgtcgagatc
cacgagggcgcggtcgaatcgatcgtgaaggagaagcgggccgaggaggtcggcgacttc
ggcttcgacttcgacagcctcttcgacgacgacgagcgggatgccgcgccgtcgcccgtg
cccgcgcgtccggaatggccgaagaagcagaagctggccttcgagcgcgacatgctgggg
ctctacgtgtcagaccacccgcttgccggactcgaggccccactcgcgaagcacgcgtcg
acgaccatcaccgagctgatgacctcggattcgacgcaggatgccgacaccgtcacggtc
gcgggtctcgtcacgagcgttcagcaccgcatcgcgaaggcctcgggcaaccagtacggc
atgatcacggtcgaggacttctcgggcgagatcacggtgatgttcatgggcaaggcctac
caggagttcgcgcccggcctgcaggccgattcgatcgtggtcgtgcgtgggcgggtcagc
atgcgcgacgacggcatgaacctgcatgcctacagcgtgttcacgcccgaaatcggtcag
gacgaagagtcgggcatcgtgaagatcacgctgcccgaccagcgggcgacgcaggagacg
accgaggcgctccgagacgtgctcgtacgtcatcgcggggagaccgaggttcggatcacg
ctgacgaagggccgcgtcggtcgcgtcttcgaggtcgggcagtacccggtcacggtgacc
gccgacctctacggggagctgaagagcctgctcggcccgaactgcctcgtgtga
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