Ashbya gossypii (Eremothecium gossypii): AGOS_AAR020W
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Entry
AGOS_AAR020W CDS
T00167
Name
(RefSeq) AAR020Wp
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ago
Ashbya gossypii (Eremothecium gossypii)
Pathway
ago03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ago00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AGOS_AAR020W
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ago03041
]
AGOS_AAR020W
Enzymes [BR:
ago01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AGOS_AAR020W
Spliceosome [BR:
ago03041
]
Complex C
Other components
Step II factors
AGOS_AAR020W
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
PWI
AAA_19
nSTAND3
ABC_tran
AAA
SRP54
AAA_16
PhoH
Motif
Other DBs
NCBI-GeneID:
4618788
NCBI-ProteinID:
NP_982561
UniProt:
Q75EQ9
LinkDB
All DBs
Position
I:376231..379566
Genome browser
AA seq
1111 aa
AA seq
DB search
MSAVEKEILRILDIDDTVVSEFVLNIYAQSDDIQSFKKQLLDLDVGIDEARTDELYCCIE
KHKGQIPGDGDASGTTNELQQLLKAELGVDDPVVAEYVADIYSKHKSLTKFHEKLSEIDS
GLSSASIFKIHKLLRQTCPTGEKTEAPKADVSALCLPNREARWDDIRGEGFMEPELDVTP
IEGKIYRAVIRNIKPFGCFARVLGTKRSCEGLIHISQLSHSRVGSPNDVVSVGDHVYVKI
TKVQDNGKLSLSMREVDQATGQTATVNRGRSDERTVYRRQLSSPERWEIRQMIQSGVSSI
DDYPELKEELSHLQQQTQVAGSKHSNESDELIDVELNTEHEPKFLSGHTATAKKPELPTI
VKLPKGSLNNTAMTGSKLLQEHRQEKLALQKSTDKKERLLRELDDSGHKKKAFEDKQRAL
TAWERKRMAEKVTYGKRTNLSIKQQRESLPVFKMRETLVSAIRDNQFLVIVGETGSGKTT
QITQYLDEEGFSVGGMIGCTQPRRVAAVSVAKRVSEEMGCKLGEDVGYTIRFEDQTSRKT
RIKYMTDGMLQVEALLDPTMSRYSVIMLDEAHERTVSTDVLFSLLKQAALKRPDLRVIVT
SATLDSEKFSKYFLDCPVIKISGKTFPVDVIYSETPQLDYIEAALDTVMEIHINESPGDI
LVFLTGQEEIDACCEILYERVQALKETIQELLILPVYSALPSEVQSKIFEPTPKGSRKVI
FATNIAETSITIDGIYYVVDPGYAKLNIYNPKIGIEQLVVSPISQSQADQRKGRAGRTGP
GKCYRLFTEAAFHREMVPNSVPEIQRQNLEHTILMLKAMGINDLLNFDFMDPPPRSSMVH
ALEALYNLQALDEDGYLTQLGKRMSQFPMEPALSKSLIASVEQGCSDEILTIIAMLSVQN
VFYRPKDKIQEADNRKARFHHPFGDHLTLLNIYNRWQENNFSKSFCAENFLHERHLRRAK
DVKEQLKRIFKNLDLPIRSCHGNVDLIRKTLVSGFFRNAAKRDPQVGYKTIVDETAVSIH
PSSCLFGKECDYVIYHSLVLTSKEYMSQVTLIDPKWLMENAPHFYKLSDPSGEKQKRLKI
VPLHNRFSKDQDSWRLSSIRQSKERALGIKR
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgtagagaaggaaatactcaggatactggacatagatgacactgtggtgtca
gagtttgttttaaacatttatgcgcagagcgatgacatccaaagctttaagaaacagctt
ctggatctagatgtgggaatcgatgaagcgcgtaccgatgagctatactgctgcatagag
aaacacaaagggcagataccaggcgatggcgatgcaagtggtacgacaaacgagctacaa
cagctgctgaaggcggagcttggcgtggacgacccggtggtcgccgagtatgttgcagac
atctactcgaagcacaagtcactgaccaaatttcatgaaaaactctccgagatagacagt
gggctgagttcggcttcgatattcaagatccacaagcttctgaggcagacttgtcccacg
ggggagaagaccgaagcgcccaaggcggacgtctcagcactctgcctgccgaatcgagag
gctaggtgggatgacattagaggcgagggcttcatggagccggagttggatgtcacgccc
attgagggaaaaatctaccgcgcagttattcgcaacatcaagccgttcggatgttttgcg
agggtattgggaactaaacgcagctgtgaaggcctcatacacatttcgcaactatctcac
agtagagtggggtctcctaacgatgtggtttccgttggtgatcacgtatatgtcaagata
accaaggtgcaggataacgggaaactttctttgagtatgagggaagtcgatcaagctacc
gggcagactgccactgtcaatcgcggcagatctgacgagcgtacagtatatcgtcgtcag
cttagctcgcctgaaagatgggagatacggcaaatgatacaaagcggcgtttcgtccata
gatgactacccagaactcaaggaagaactcagtcacctgcaacaacagacccaggtcgct
gggagcaagcatagtaatgagagtgatgaactgatagatgtagaactgaatacggagcat
gagccgaagttcctgtcgggacacacagcaacagctaagaaacccgaactccccacaatt
gtgaagctgccaaagggatctctaaataacacggccatgacagggtcgaaactgctgcaa
gaacatcggcaagagaagctagccctccagaaaagtaccgataagaaggaaagattactc
agagaactggatgattctgggcataaaaagaaagcgttcgaagataaacaacgggccctt
accgcttgggaacggaaacggatggccgaaaaggtgacctatggcaagaggaccaatcta
tcaataaaacagcaaagggaatcgttgcctgtgtttaaaatgcgtgaaactttggtcagt
gcaattagagataaccagtttttggtcattgtcggtgagacaggttccggcaaaaccaca
caaataactcaatatttggatgaggaaggattttcagtaggtggaatgatcggatgtaca
caaccacgtcgtgtggcagcagtatcggttgctaaaagagtgtcagaagaaatgggttgt
aagttgggtgaagatgtgggatacacaattcgatttgaagatcaaacttcccgtaaaacc
aggattaaatatatgacggacggtatgttacaagtagaggctttacttgacccaactatg
tccagatattccgttattatgcttgatgaagcgcatgagcgtaccgtttctactgatgtt
ctcttttcccttttgaagcaagctgccttgaaacgtccagatcttcgcgtgatagtgaca
tctgcgacacttgactcagagaagttctccaagtattttcttgattgtcctgtcatcaag
atcagcggtaaaacgttcccagttgacgttatttactcagaaactcctcaactagactac
attgaagctgctcttgatacagtgatggagatccatataaatgaaagcccgggtgatata
ctagtgttcctgactggtcaggaggaaatcgatgcatgttgcgaaatcctttatgaacga
gtacaagccctgaaagagacaattcaagaactgctgatacttccggtatattctgcactt
cccagcgaagttcagtccaagatatttgagcctaccccaaaaggttccagaaaggtgatc
tttgcaacaaacattgcagaaacatccattacgatcgacggtatttactacgtggtggac
cccggttatgcgaagctcaatatttataacccgaagattggtatagaacaattggttgta
tctcccatatcccagtctcaggcggatcaacgtaagggaagagctggtcggacaggtcct
ggcaagtgttatcggttgttcacagaggctgccttccaccgggaaatggttccgaattcg
gtaccagaaatccagcgacagaacttggagcacacaattctcatgctcaaggccatgggc
attaatgacctactgaattttgatttcatggacccgccccctcggtcgtctatggtgcac
gcgctggaagcgctatacaatttgcaagcactggacgaagacgggtacctgacacagctt
gggaaaagaatgtcccagtttccgatggagccggccctttcaaagtcgctgattgcttcc
gtagaacagggttgttccgacgaaatcctgaccattattgcaatgctgtcggtacagaac
gttttttaccggcctaaggacaaaatccaggaagcagataatcgaaaagcacggttccac
catcccttcggagatcacttgactctgctcaacatctataatcggtggcaagaaaacaat
ttctcgaagtctttctgtgctgagaacttcctgcatgaacgccatctcaggcgcgcgaaa
gacgtgaaagaacaactcaagcggatattcaaaaacttagacttacctataagaagctgt
catggcaatgttgacctgattagaaaaacgctggtatccggcttcttccgaaatgcggct
aagcgggacccacaagtgggctacaagaccatagtggatgagactgccgtcagcatccac
ccctccagttgcctttttggaaaggaatgtgactatgtcatatatcacagtctggtcctg
acttccaaggaatatatgtcgcaagtgacgctaatagatcctaagtggttaatggaaaat
gcacctcatttctacaaactctctgatccttccggcgaaaagcagaagcgtctaaagatt
gtgccattgcacaatagattctccaaggatcaagactcatggcgcctaagctctatccgc
caatccaaggagcgtgcactaggtattaagcgctag
DBGET
integrated database retrieval system
