Agrobacterium tumefaciens H13-3: AGROH133_07410
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Entry
AGROH133_07410 CDS
T01432
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00470
D-Amino acid metabolism
agr00550
Peptidoglycan biosynthesis
agr01100
Metabolic pathways
agr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AGROH133_07410 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AGROH133_07410 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AGROH133_07410 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agr01011
]
AGROH133_07410 (ddl)
Enzymes [BR:
agr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
AGROH133_07410 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
agr01011
]
Precursor biosynthesis
Amino acid ligase
AGROH133_07410 (ddl)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
ATP-grasp_3
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ADY65004
LinkDB
All DBs
Position
circular:complement(2008487..2009413)
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AA seq
308 aa
AA seq
DB search
MGGKHVAVLLGGFSSERPVSLSSGNACALALEGEGYKVTRVDVGRDIAAVLGELRPDVAF
NALHGPFGEDGTIQGILEYLAIPYTHSGVLASALAMDKAQAKKVAAAAGIPVADERVMNR
FEFTSEHPLAPPYVVKPVREGSSFGVVIVKEDQSHPPQILTSSEWRYGDHVMVERYIHGR
ELTCGVLDGEALGVTEVVPLGHNFYDYDAKYAAGGSKHVIPAEISPKIYQKIQTLAVMAH
RAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAAHAGRSFGNLVSWM
VEDASCLR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaagcacgtagctgttcttttgggtgggttttcgtcggagcggccggtcagc
ctctcgtccgggaacgcttgcgcgctcgcccttgagggcgaggggtacaaggtcacccgg
gtcgatgtggggcgcgatatcgccgccgtactcggcgagctgcgcccggatgtcgccttc
aatgcgctgcatggccccttcggtgaagacggcaccattcagggcattctcgaatatctc
gccattccctatacccattccggcgtgctcgcttctgcacttgccatggacaaggcgcag
gccaagaaagtggctgcggctgccggcattccggtggctgacgaacgcgtcatgaaccgg
ttcgaattcaccagcgaacatccgcttgcgccgccctacgtcgtgaagccggtgcgcgaa
ggctcgagcttcggtgtggtgatcgtcaaggaagaccagtcgcatccgccgcaaatcctt
acctcgtccgaatggcgttacggcgatcacgtcatggtcgagcgttacatccatggtcgc
gaactgacctgcggcgtgctcgacggcgaggcgctaggtgtgacggaagtggtgccgctg
ggtcacaatttctatgattacgacgctaaatacgcagccggtggctcaaagcatgtcatt
ccggcagaaatttcaccaaaaatttaccaaaaaattcaaacactggcggttatggcgcat
cgggcgatcgggtgccgtggcgtaagccgttcagactttcgttacgacgaccgcttctca
gaagatggcgaagttatctggcttgaagtgaatacgcagccgggcatgacgccgacctcc
ctggtgccggaaatggcggcccatgctggccgctcctttggtaaccttgtcagctggatg
gtggaggacgcttcgtgtttgcggtga
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