Agrobacterium tumefaciens H13-3: AGROH133_07441
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Entry
AGROH133_07441 CDS
T01432
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine-D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr00470
D-Amino acid metabolism
agr00550
Peptidoglycan biosynthesis
agr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AGROH133_07441 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AGROH133_07441 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
agr01011
]
AGROH133_07441 (murD)
Enzymes [BR:
agr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AGROH133_07441 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
agr01011
]
Precursor biosynthesis
Amino acid ligase
AGROH133_07441 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
TrkA_N
MurD-like_N
2-Hacid_dh_C
UDPG_MGDP_dh_N
IlvN
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ADY65011
LinkDB
All DBs
Position
circular:complement(2017048..2018457)
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AA seq
469 aa
AA seq
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MIPVSSFRGKKVALFGLGGSGLVTARALVAGGADVVAFDDNPDSVAKAQAEGIPTADLRT
IDWHSFSSFVLAPGVPLTHPKPHWSVDLARAAGVEIIGDIELFIRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKASGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTI
NPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSYSTLIADRIERAGVK
VERISKRNVVSEGLYAEGSRILRAHGGKSSLLVDLDGIQTLRGSHNAQNAAAAIAACLAV
GVSEEDVRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSYERIYWIAGG
LPKAGGIASLAPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAEKD
ATAGSIVMLSPACASFDQYKNFEIRGDSFVAQVAALDGMTMLVHSGKGG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtctcgtcgttcagaggtaagaaggtcgcgcttttcgggcttggcggttcg
ggccttgtcacggcccgggcgctggttgccggcggggcggatgttgttgctttcgacgat
aatcccgacagcgtcgccaaggctcaggccgaagggataccgacggctgatcttcgaacg
atagactggcattccttttcgtctttcgtgctcgcacccggcgtgccgctaacgcatccg
aagccgcactggtcggtcgatcttgcccgggcggcgggtgtcgagattatcggcgatatc
gagcttttcattcgcgagcgccgggcgcatgcgccggattgccccttcatcgccatcacc
ggcacgaacggcaaatccacgacgaccgcactgattgcccatatcctcaaggcttcgggc
cgcgatacacaactcggcggcaatatcggcactgcggtgctgagcctcgatccgccgaaa
gcgcaacgtttctatgtcgttgaatgctcgtcctaccagatcgatctggcgccgacgatc
aatccgacggccggcattctgctcaatctgacgcccgaccatctcgaccggcacggcacc
atgcagcattatgccgatgtcaaggaacggcttgttgccggcagtggcacggcaattgtc
ggcgttgatgacagctattccacgctgatcgccgaccgcatcgagcgtgccggcgtgaag
gtggagcgcatttccaagcgcaatgtcgtttccgaaggtctttatgccgaaggcagccgc
attctgcgggcgcatgggggcaagtcctcgctgctggtcgatctcgacggcatccagacg
cttcgcggcagccacaatgcccagaatgcagcggctgcaattgccgcatgccttgccgtc
ggcgtttccgaagaggacgttcgcgcaggtctcaagtccttccccggcctaaaacatcgc
atgcagccggtcggtcggcgcggcaatgtcactttcgtcaatgacagcaaggccaccaat
gccgatgccgcagcaccggccttgtcgagctatgagcgcatctattggatcgcgggcggt
ctgccaaaggccggcggcattgccagccttgcgcccctgtttccgcgcatcgccaaagct
tatctgatcggcgaggcggcggcggaatttgcagcgacgctcggcgaagccgtgccttat
gaaatatcaggcacgctggacaaggcggtgcagcatgcggcggcggatgcggaaaaagat
gcgacggccggcagtatcgtgatgttatccccggcttgcgcaagcttcgaccaatataag
aactttgaaatcagaggtgattcgttcgtcgcgcaggttgcggcgctcgatggcatgacg
atgctcgttcactctggaaaagggggctga
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