Actinomadura graeca: AGRA3207_006399
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Entry
AGRA3207_006399 CDS
T07938
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
agra
Actinomadura graeca
Brite
KEGG Orthology (KO) [BR:
agra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
agra03016
]
AGRA3207_006399 (truB)
Enzymes [BR:
agra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AGRA3207_006399 (truB)
Transfer RNA biogenesis [BR:
agra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AGRA3207_006399 (truB)
Prokaryotic type
AGRA3207_006399 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QXJ24976
LinkDB
All DBs
Position
7227565..7228443
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AA seq
292 aa
AA seq
DB search
MESVESGLVIVDKPSGWTSHDVVGRMRRLARTRRVGHAGTLDPMATGVLVVGVGKATRLL
GHLALTEKGYDATIRLGESTNTDDAEGETTATASAAGVSDAALEAGIAALTGPIEQIPPQ
VSAIKVNGERAYKMARKGEEVALRARPVTVHAFTVTGVRRHGDVVDVDASVACSSGTYIR
ALARDLGASLGCGGHLTALRRTRVGPYDLGMARTLDELAVKTEVLPMEEAVASAFPRRDV
SDDDARRIAHGGRLPAAGQGPGPVGVFAPDGTLLALVEERDGLARPLAVFVS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcggttgaatcgggcctcgtcatcgtcgacaagccctccggctggacctcgcac
gacgtggtcggccgcatgcggcggctcgcgcggacgcggcgggtcgggcacgccggcacg
ctcgacccgatggcgacgggcgtcctggtggtcggcgtcgggaaggccacccgcctgctc
ggccatctggcgctgaccgagaagggctacgacgcgacgatccgcctgggcgagtcgacg
aacaccgacgacgccgagggcgagaccaccgccaccgcgtccgccgccggggtctccgac
gcggcgctggaggccgggatcgcggcgctcaccgggccgatcgagcagatcccgccgcag
gtcagcgcgatcaaggtgaacggcgagcgggcctacaagatggcccgcaagggcgaggag
gtcgcgctgcgcgcccgtccggtgaccgtgcacgcgttcaccgtgaccggtgtgcggcgg
cacggggacgtggtcgacgtggacgcctccgtcgcctgctcgtccggcacctacatccgg
gcgctggcccgtgacctcggcgcgtccctcggctgcggcgggcatctgaccgcgctgcgc
cgcacccgcgtcggcccctacgacctgggcatggcccgcacgctggacgagctggccgtg
aagacggaggtcctgccgatggaggaggcggtcgcgtccgcgttcccgcgccgggacgtc
tcggacgacgacgcccgcaggatcgcgcacggcgggcggctcccggcggcgggacagggc
ccggggcctgtcggcgtcttcgcgcccgacgggaccctcctggcgctcgtcgaggagcgg
gacgggctggccagaccgctcgccgtcttcgtctcctga
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