Aphis gossypii (cotton aphid): 114119533
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Entry
114119533 CDS
T05869
Name
(RefSeq) DNA repair protein RAD50
Organism
ags
Aphis gossypii (cotton aphid)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
SbcC_Walker_B
Rad50_zn_hook
AAA_29
AAA_13
ABC_tran
AAA_22
Motif
Other DBs
NCBI-GeneID:
114119533
NCBI-ProteinID:
XP_027836914
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MSTLESISIQGIRSYHPDEKQTLKFQRPLTLILGQNGCGKTTIIECLKYITCSDLPRNTK
QGGFVWDPKLSDYHTVKGNVKLSFHDTKDTRVVVSKTLESTQKYTTVTTKSLDQTISRKG
QSTSHKCADLDDVMCTYLGVSKPILKDVVFCHQEDSSWPLDEDKKVKEKFDSIFDVGKYD
KCIKQIQMEIKGISGDKRTANNNIQHFWQYREEARNKRATLENKKSCLDELQQKMNNIEK
EIEPLDKRFNEILYKEQNFSSLKNKLLTCEGTLNSIRLAKKDLKLLIKLEFKGNDSDLNE
ALDNFNKNLLQKEEEKYELICQKNDAIANENKIQENISKEQINLGRYQSEEKQNQNNVQK
QNVKIIELGNAMQINLPDLTEFNRIQVIHNLSNSLNSMNDKLESTLKEHREVETKLQSNI
DSMRVEKAKLDQEIKIKEKQMLENTSEIKKFKRDVEQVKHSAEKLSALQELKFDIETKLN
KLRGSFNIENVKTELNKKKAEKHEQNIKLEVIEKEEQKLQLLSIVQAELDTVILNKSGVE
NKLKILKNKVNCVLKDLLGFIPQEKLKLEFTSFLDKLSDTIRCNRKSIAEKQKQLTTLEA
NYNHTKEKLRTKQIDLSNDENALSDMCQGQEYETILKEVNEKVEELQAQKGSVSTSGHLF
RRYIKNLEAQDPSCPLCHRCFGSVDEVTELINDLNMRVHKIPSELEVTTTQLEIHLEKQS
KLQQLRPTHTRISVLKQTEIPQLKNELEIISNSLRKCRDELTKLSDENGKLETNETNAKN
IQSDIIMIDSFDNDVKRYLKEEQRLTTKMSESGSIRNLQDTISEKNALKNTINEICNVLE
KKQHELNEYTETLHKLQTQQNKITSDELNIKSKMQDEKSVIDKLKDLQNLEATLSLELDN
ARKTIEPIQEKLNTCINTFEQTKKQQNRQIENNRREIIILEKKIQEINNLQSSIENYEKK
EWALRIKETNSLLDNLTKEKMNYIEEQKNLQNQIDSINEFNANQEVKKIDLENNKKLRLK
SKEEIECLSKINKLHEDVGTMDVSSLISEKEANRKKAGDLLVEKNKSLGRKQELENIISQ
ITEELTAIHFKNSEDIYLHGKVQLEILNRVEKDLIKYNKALEWAMNRFHKERMQSINTII
KKLWRDIYTGNDIDYIQIKTSSDDKPIQTDTSKKRTFNYRVVQIKNDIELDMRGRCSAGQ
KVLACLIVRMALAETFSKNCGILALDEPTTNLDESNIQSLAESLSEIITRRSAQKSFQLL
IITHDANFLRKLSARDMVDTYYEVKRSNEGISIVCEQDIKLLP
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtctacattagaatcaatatcaattcaaggtattagaagttatcatccagatgaaaaa
caaactttaaaattccaaagacctctgacgctgatcttggggcaaaatggttgtggaaaa
acaactataattgaatgtctgaaatatatcacatgttcagatctaccaagaaatactaaa
caaggtggttttgtttgggatcctaaactatcagattatcatactgttaaaggcaatgta
aaactatcatttcacgataccaaagatacccgtgtagtggtgtctaagactttagaatca
actcaaaaatatacaactgtcactacaaaatcgctcgatcaaacaatttctagaaaaggc
cagagtacttcacacaaatgtgcagatcttgatgatgtcatgtgtacttatttaggtgtt
tcaaaacctattttaaaagatgtcgttttttgtcatcaagaagactctagttggccttta
gatgaagacaaaaaggtaaaggaaaaatttgattcaatatttgatgttggaaaatatgac
aaatgcattaaacaaattcaaatggaaataaagggtattagtggagataaaagaacagca
aacaataatatacaacatttttggcaatatcgagaagaagcacgtaacaaaagagctaca
cttgaaaataaaaaatcttgtttagatgaattacaacaaaaaatgaacaatattgaaaaa
gaaatagagccattagataagagatttaatgaaatattgtataaagaacaaaatttttct
tctttaaaaaataaattattaacttgtgaaggaactttgaattctattcgattagctaag
aaggatttgaaattattgatcaagctagagtttaaaggaaatgattcagatctcaatgaa
gcattagacaattttaataaaaatttgcttcaaaaagaagaagaaaaatatgaacttatt
tgtcaaaaaaatgatgcaattgctaatgaaaataaaattcaagaaaatataagcaaagaa
caaataaatttaggacgatatcaaagtgaagaaaaacaaaatcaaaataatgtacaaaaa
caaaatgtaaaaataattgaattagggaatgcaatgcagattaatttgccagacttaact
gaatttaatcgtatacaagtgatacataatctttcaaatagtttaaattctatgaatgat
aaattagaatctacactaaaagaacatagagaagttgaaaccaagttgcaatcaaatatt
gattcaatgagagtagaaaaagcaaaactagatcaagaaattaaaatcaaagaaaaacaa
atgttggaaaatacgtctgaaattaaaaaatttaaaagagatgttgaacaagtaaaacat
tcagctgaaaagttatctgctttacaagaattaaaatttgatattgaaacaaaattaaat
aagctcaggggatctttcaatattgaaaatgttaaaacagaactaaataaaaaaaaggca
gaaaaacatgaacagaatataaaattagaagttatagaaaaagaagaacaaaaattacag
ttattaagtatcgttcaagcagaacttgacactgttatattgaataaatctggagtagaa
aataaactcaaaatacttaaaaacaaagtgaattgtgtgttaaaagatttacttggattt
ataccacaggaaaaacttaaacttgagtttacatcatttttagataaattatctgataca
atcagatgtaaccggaaaagtatagctgaaaaacaaaagcagttaactacactagaagca
aattataaccacactaaagaaaaattgcgtacaaaacaaatagatctttccaatgatgag
aatgctctaagtgatatgtgtcaaggtcaagaatacgaaacaatattaaaagaagtcaat
gaaaaagtggaagaattgcaagctcaaaaaggttctgtatcaacttctggtcatcttttt
aggcgatatataaaaaatttagaagctcaggatcctagttgtccattatgtcatcgatgt
tttggttctgttgatgaagtgactgaactgattaatgatttaaatatgagagtacataaa
attccaagtgaattagaagtaacaactacacaattagaaatacatttagaaaagcaatca
aaacttcaacaattaagacctactcatactcggatatcagttttgaaacaaacagaaata
cctcaactcaaaaatgaacttgaaattataagtaatagtttgagaaaatgtcgtgatgaa
cttactaaattgtcagatgaaaatggaaaactagagactaatgaaacaaatgcaaagaat
attcaatctgatataataatgattgatagttttgataatgatgttaaacgatatttaaaa
gaagagcagcgtttaacaacaaaaatgagtgaatctggttccattagaaatcttcaagat
acaatttctgaaaagaatgctttaaaaaatactataaatgaaatttgcaatgttttggaa
aaaaaacagcacgaattaaatgaatatactgaaaccttacacaaattacaaacacagcaa
aataaaataactagtgatgaattaaatattaaaagtaaaatgcaagatgaaaaaagtgta
atagataaattaaaagatttacaaaatcttgaagcaacattaagtttggaattggacaat
gctagaaaaacaatagaaccaatacaagaaaagttgaatacatgtattaatactttcgag
caaactaaaaaacaacaaaatagacaaattgaaaataatagaagagaaattattattctt
gaaaaaaaaattcaagaaataaataacttgcagtcttcaattgaaaattatgaaaaaaaa
gaatgggctctacgcattaaggaaacaaatagtttattagataatctcactaaagaaaaa
atgaattatattgaagaacaaaaaaacttacaaaatcaaattgattccattaatgaattt
aatgccaatcaagaggttaaaaaaatagacttagaaaataacaaaaaattaagactgaaa
tcaaaagaagaaattgaatgtttatctaaaataaacaaacttcatgaagatgttggaact
atggatgtgagcagtttaatcagtgaaaaagaggctaatagaaaaaaagctggagattta
ttagttgagaaaaacaaatcccttggtagaaaacaagagctggagaatatcattagtcaa
atcacagaagagttgacagctattcatttcaaaaattctgaagacatatatttacatgga
aaagtgcagctagaaatattaaaccgtgttgaaaaagatctgataaagtataataaagct
cttgagtgggcaatgaatcggtttcataaagaaagaatgcaaagtattaatactattatt
aaaaaattatggagagatatttataccggcaatgacattgattatattcaaataaaaaca
tcttctgatgataaaccaatacagacagatacaagtaagaaaaggacctttaactataga
gtcgtacagataaaaaatgatattgaattggatatgcgaggaagatgcagtgcaggtcaa
aaagttttggcttgtctaattgtaagaatggcattagcagaaacattcagtaaaaattgt
ggcatacttgcattagatgaacctactacaaatttagatgaatctaatattcaaagttta
gctgaatcattatcagaaattataacacgtcgcagcgctcaaaaatcattccaattgctc
atcatcacgcatgatgctaatttcttacgtaaattgtctgccagagatatggttgataca
tattatgaggtgaaaagaagtaatgaaggaatttcaattgtgtgtgaacaagatattaaa
ttgttaccataa
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