Agarivorans sp. TSD2052: M0C34_11855
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Entry
M0C34_11855 CDS
T08089
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
agz
Agarivorans sp. TSD2052
Brite
KEGG Orthology (KO) [BR:
agz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agz03000
]
M0C34_11855
Transcription factors [BR:
agz03000
]
Prokaryotic type
Other transcription factors
Others
M0C34_11855
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_50
Sigma54_activ_2
Sigma54_activat
PAS_8
AAA_22
PAS
AAA_16
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UPW16940
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Position
complement(2619080..2620552)
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AA seq
490 aa
AA seq
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MRIELNCQQNTQVFSAVLGVLVKHGLALQAMQSVDSGHLFLHITEIELPLTQQLLSEFRY
LQGVSDARIVSALPSEVEHKEVQILLDNVPYPVVLIDKSAQIRQFNQAFEQSCGDTPQPL
ANSDISKFLRGFSVQRWFGSGSGKRELVEIQLSGRVYMADIIPLSETSLFSHLPGAIMLF
KSAHWLESSFDLSQIELGISEGRLVASSDETNNVLNSLKRLNEHPMPTLLFGEAGVGKRF
LARLLNELSMGSDEHFHCVSCQNQEHSLSEQLAEIAAEKPNTVLLTNIEHLKSSEIEDAI
VSLTAPQLGIKHLLFSSRYSPDQLAAMWGGDSYYSMIKNSINVPPLRQRKEDIVPLTQSW
LDFQYAKHQEVAPRLSREVKRYLSSLSWPGNIPQLYQVLQNSLDIGSMKSWQVSDIKYHH
ERVVDDVSVESLLQQDYHSAMGQFEHLLLSYHYPQHPSSRLLAKKLGLSHTAIANKLREH
NIRNKTDLDN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatagagttaaactgccaacagaatacccaagtttttagcgctgtgttaggagtg
ttagttaaacacggccttgcattacaagccatgcaaagtgttgatagcggacatttattc
cttcatatcaccgaaattgaacttccacttactcagcagttacttagcgaatttcgttat
ttacaaggtgtttccgatgcgcggatcgtgtctgctctgccttcagaggtagagcataaa
gaagttcaaatcttactcgataatgttccttacccagtggtgctgattgataagtcggct
caaattcgtcagtttaatcaagcctttgaacaatcttgtggtgataccccccaaccactt
gccaatagcgatatcagtaagtttttacggggctttagtgttcaacgttggtttggtagt
ggttcaggtaaacgcgaattagttgaaattcagctaagtggtcgtgtttatatggctgac
atcataccgctgtctgaaacatccttattttcacatttgcccggtgccataatgctgttt
aaatcagcgcattggttagagtcgagttttgatttgtctcagatagaactcggtatcagt
gaagggcgtttggtggcaagtagcgatgaaaccaacaatgtgcttaacagcctgaaacgc
ctaaatgaacatcctatgcctactttgctgtttggtgaagcaggggttggtaagcgcttt
ttagctcgcttgcttaatgagttatcaatgggcagcgatgaacattttcactgtgtgagc
tgccaaaaccaagaacatagcttatcagagcagctagcagagatagccgctgaaaaacct
aatacggttttgttgaccaatatcgagcatttaaaaagtagtgaaatagaagatgccatt
gtctcgttaaccgctccacaactcggcattaagcacttacttttctctagtcgttatagc
cctgatcaactggcggctatgtggggaggggatagctattactcaatgattaaaaatagc
attaatgtgccgcctcttcgtcaacgtaaagaagatatcgtaccgcttactcaatcttgg
ctagattttcaatatgccaagcatcaagaggttgcgccaaggcttagccgagaagtaaaa
cgctaccttagttcccttagttggccgggcaatattcctcagctttatcaggtgctgcaa
aactctctggatataggcagtatgaaatcttggcaagttagcgacattaaatatcatcac
gaaagagtggtggacgatgtaagcgtagaaagtttgctgcagcaagattaccactcagcg
atggggcagtttgaacatcttttgttaagctaccattaccctcagcatcctagttctcga
ctactcgccaagaaactgggcttatcacataccgccattgccaataaactgcgtgaacat
aatattcgcaataaaactgatttagataattag
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