Aristaeella hokkaidonensis: JYE49_03825
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Entry
JYE49_03825 CDS
T09243
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ahc
Aristaeella hokkaidonensis
Pathway
ahc03030
DNA replication
ahc03430
Mismatch repair
ahc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ahc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYE49_03825 (holA)
03430 Mismatch repair
JYE49_03825 (holA)
03440 Homologous recombination
JYE49_03825 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ahc03032
]
JYE49_03825 (holA)
03400 DNA repair and recombination proteins [BR:
ahc03400
]
JYE49_03825 (holA)
Enzymes [BR:
ahc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYE49_03825 (holA)
DNA replication proteins [BR:
ahc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JYE49_03825 (holA)
DNA repair and recombination proteins [BR:
ahc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JYE49_03825 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QUC67839
LinkDB
All DBs
Position
complement(833822..834829)
Genome browser
AA seq
335 aa
AA seq
DB search
MDRKDFSRALSQHSLPQVLLFEGEEEHLKQEALAELRHAVLPEGMETLNETILEDPSVDQ
LIADVETQPFMADKRLIIVRDLPALMGRSEADERLIAYLPSVPETSFLLFYCTGKPDGRK
KLYNAVKKLSGIVTFSPLRGTELTRFVVSSFQEAGKECDDRTAEYLIFTVGSDAGLLRNE
IQKLASCSIDRTAILPEDVTSLATPSTECTVFQMIDAVVTGQKSRAFTLLRNQLLSGTDR
MAILSMLLRQYRLLQHIKIMQYEKRGNDFIRSALGVPPFAVDQYVRQASGYTGGQVKSAV
RICFDTEYALKSGRMSQDGAVETVVLKLLNLREKS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaaaagacttttcccgtgccctgtcacagcattccctgccccaggttcttctc
tttgaaggcgaagaggaacatcttaagcaggaagccctggctgaactgcgccatgccgtt
ctgcccgagggcatggaaacattgaatgaaaccattctggaagatccttctgtggatcag
ctcatcgcagatgtggaaacccagccctttatggctgacaaacggctgatcattgtccgt
gatttaccggctcttatgggacgttccgaggcggatgaaaggctcattgcttaccttccc
tcagtccctgaaacttctttccttctcttctactgtaccggaaaacctgacggaaggaaa
aaactttataatgctgtcaaaaagctctccgggatcgttactttttctccgctccgcggt
acggagctgacccgttttgttgtcagttcttttcaggaagcaggaaaagaatgtgatgac
cgtacagctgaatacctcatctttacggtaggctcagacgcagggctgctgcgcaacgaa
atccagaaactggcttcctgttccatagaccgcactgcgattctgccagaggatgtaacg
tctcttgccaccccttccactgaatgtaccgtattccagatgatcgatgccgttgtaacg
ggtcagaagagccgtgcctttaccctgctgcgcaaccagctgctttccggaacagatcgc
atggccatcctttcaatgcttctgcgccagtatcgtctgctgcagcatatcaaaatcatg
cagtatgagaaaagaggaaacgattttatccgttccgctctcggggttccgccttttgcc
gttgaccagtatgttcgtcaggcctccggttataccggcggacaggttaaaagcgctgtc
cgcatctgttttgacacggaatacgccctgaaatccggacggatgtcccaggacggtgca
gttgaaacagtggttctgaaactgcttaaccttcgcgaaaaaagctga
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