Aeromonas hydrophila AL06-06: RY45_15475
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Entry
RY45_15475 CDS
T03748
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ahh
Aeromonas hydrophila AL06-06
Pathway
ahh00250
Alanine, aspartate and glutamate metabolism
ahh00310
Lysine degradation
ahh00350
Tyrosine metabolism
ahh00650
Butanoate metabolism
ahh00760
Nicotinate and nicotinamide metabolism
ahh01100
Metabolic pathways
ahh01120
Microbial metabolism in diverse environments
Module
ahh_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ahh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RY45_15475 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RY45_15475 (gabD)
00310 Lysine degradation
RY45_15475 (gabD)
00350 Tyrosine metabolism
RY45_15475 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
RY45_15475 (gabD)
Enzymes [BR:
ahh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
RY45_15475 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
RY45_15475 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
RY45_15475 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AJQ55415
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All DBs
Position
3443824..3445287
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AA seq
487 aa
AA seq
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MSASQPALSLIKSLAYIDGRWCEAGGGRRFEVHNPATGQVITQVPDMDEGDTRRAIAAAH
AAQPGWAALTAKERSNRLYAWFELIMANQEELARIMTCEQGKPLAEAKGEVAYGASFIQW
FAEEGKRAYGRTIPGFSSDRRLATIKQPVGVVAAITPWNFPIAMITRKAGPALAAGCTIV
IKPAAETPLCALALAALAEQAGIPAGVINIVTSHQAAAVGNELCNNKTVRKLSFTGSTRI
GKLLMRQCADTMKKLSLELGGNAPFIVFDDADLDAAIAGALASKYRNAGQTCVCANRILV
QAGIYDAFAEKLTAAVKAFKVGDGMIEGTQIGPLINPAAASKVAELVKQATAAGAELLLG
GEAHPAGPLFYQPTILSKVDKTNPILQEEIFGPVAPLVRFETEAEAIALANDTPYGLAAY
FYGRDIARVWRVAEQLEYGMVGINEGIISTELAPFGGIKESGLGREGAAEGLEEYLETKY
LCFGGIR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatcacaacccgcactctccctgatcaaatcccttgcctatatagatggccgc
tggtgtgaagccggcggcggacgccggttcgaggtgcacaacccggccaccggtcaggtc
attacccaggtgcccgacatggacgagggcgacacccgccgcgccatcgccgccgcccac
gcagcccaacccggctgggcggcgctcaccgccaaggagcgcagcaaccggctctacgcc
tggttcgaactcatcatggccaaccaggaggagctggcccgcatcatgacctgcgagcag
ggcaagccgctggccgaggccaagggcgaagtggcctatggcgccagcttcatccagtgg
ttcgcggaagagggcaaacgcgcttacggccgtaccattccgggcttctccagcgaccgc
cggctggccaccatcaagcagccggtcggggtggtcgccgccatcaccccctggaacttc
cccatcgccatgatcacccgcaaggcgggtccggcgctggccgccggttgcaccatcgtc
atcaagccggccgccgagacgccgctgtgcgcgctggcgctggcggcactggcggagcag
gcgggcatcccggccggggtcatcaacatcgtcaccagccatcaggccgcggcggtaggc
aacgagctgtgcaacaacaagacggtgcgcaaactctccttcaccggctccacccgcatc
ggcaagctgttgatgcgccagtgcgccgacaccatgaagaagttgtcgctggagctcggc
ggcaacgcccccttcatcgtgtttgacgacgccgatctcgacgccgccatcgccggcgca
ctcgcctccaaataccgcaacgccggccagacctgcgtctgcgccaaccgtatcctggtg
caagccggcatctacgacgccttcgccgagaagctcaccgccgcggtcaaggccttcaag
gtgggcgacggcatgatcgagggcacccagataggcccgctcatcaacccggccgccgcc
agcaaggtggccgagctggtcaaacaggccaccgccgccggcgccgagctgctgctgggg
ggcgaagcccaccccgccggcccgctcttctaccagcccaccattctgagcaaggtcgac
aaaaccaaccccatcctgcaggaggagatcttcggcccggtggcgccgctggtgcgcttc
gagaccgaggccgaggccatcgccctggccaacgacactccttatggtctggccgcctac
ttctatgggcgcgacatcgcccgcgtctggcgggtggccgagcagctcgaatacggcatg
gtcggcatcaacgaggggatcatctcgaccgaattggccccctttggcggcatcaaggag
tcgggcctcggtcgtgaaggggcagccgaggggctggaggagtacctcgagaccaaatac
ctctgcttcggcggcatccgctag
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