Actinoalloteichus hymeniacidonis: TL08_10280
Help
Entry
TL08_10280 CDS
T04472
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ahm
Actinoalloteichus hymeniacidonis
Pathway
ahm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TL08_10280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahm03400
]
TL08_10280
DNA repair and recombination proteins [BR:
ahm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TL08_10280
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TL08_10280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_30
AAA_16
AAA_5
UB2H
DUF87
AIG1
DUF4941
Motif
Other DBs
NCBI-ProteinID:
AOS62870
LinkDB
All DBs
Position
2209426..2211609
Genome browser
AA seq
727 aa
AA seq
DB search
MRVGGQAYPVVVADAPVTASSQFRPISDIPRSDGRFRVVSDYEPAGDQPQAIAELEKRLE
AGERDVVLLGATGTGKSATTAWLVEKVQRPTLVMAPNKTLAAQLANELRGFFPDNAVEYF
VSYYDYYQPEAYVPQTDTFIEKDSSINEDVERLRHSATMSLLTRRDVIVVASVSCIYGLG
TPQSYLDRSIPLAVGQEVDRDLLLRTLVDVQYERNDLAFSRGTFRVRGDTVEVIPAYEEL
AVRIEFFGDEIDKLYYLHPLTGDVVRDLTEVRIFPATHYVAGPGRMEKAIRAIEGELETQ
LTSLEHRGKLLEAQRLRMRTAYDIEMMRQVGFCSGIENYSRFMDDREPGSAPATLIDYFP
EDFLLVMDESHVTVPQVGGMYEGDASRKRTLVDHGFRLPSALDNRPLTWEEFSDRIGQTV
YLSATPGPFELGQTGGEFVEQVIRPTGLVDPKVLVKPTEGQIDDLVHEIRVRAERDERVL
VTTLTKKMAEDLTDYLLELGIRVRYLHSEVDTLRRIELLRQLRLGEFDVLIGINLLREGL
DLPEVSLVAILDADKEGFLRSGTSLIQTIGRAARNVSGEVHMYADRITDSMQRAIEETDR
RRAKQIAYNEERGLDPQPLRKRIADILDQVYTEAEDTAGSTEVGGRNASRGRKPVGERGQ
PRGSSGVLVDRDTGSMPRAELADLVQQLTDQMMSAARELQFELAGRLRDEIADLKKELRA
MDAAGLS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgtcggagggcaggcctaccctgtcgtcgtggcagatgcaccggtgaccgcctcc
tcccagttccgtccgatcagcgatatcccgcgttcggacggtcggttccgcgtcgtcagt
gattacgaacccgcgggcgaccagccacaggcgatcgccgagctggagaagcgcctcgag
gcgggcgagcgcgacgtcgtactgctcggcgcgacgggtaccggaaagtcggccaccacg
gcgtggctggtggagaaggtgcagcgcccgacgttggtgatggcgccgaacaagaccctg
gccgcccagctggccaacgagctgcgtggattcttcccggacaacgcggtggagtacttc
gtcagctactacgactactaccaaccagaggcctacgtcccgcagaccgacaccttcatc
gagaaggactcctcgatcaacgaggatgtcgagcggctgcggcactcggcgacgatgagc
ctgttgaccaggcgcgatgtcatcgtggtcgcgtccgtctcctgtatctacggcttgggt
acgccgcagtcctacctcgatcggtcgatccccttggcggtcggccaggaggtggatcgg
gacctgctgctgcgcaccctggtcgacgtccagtacgaacgcaacgacctggcgttcagc
aggggcaccttccgtgttcggggcgacaccgtcgaggtgatccccgcctacgaggagctg
gccgtacggatcgagttcttcggcgacgagatcgacaagctgtactacctgcacccgctc
accggcgacgtggtgcgggatctgaccgaggtgcggatcttcccggccacgcactatgtg
gcgggtcccgggcggatggagaaggccattcgcgcgatcgagggcgagctggagacccag
ctgacgagcctggagcaccgaggcaagctgctggaggcccagcgacttcggatgcgcacc
gcctacgacatcgagatgatgcgccaggtcggcttctgctccggaatcgagaactactcg
cgtttcatggacgaccgcgagccgggctcggcccccgcgaccctgatcgactacttcccc
gaggacttcctcctcgtcatggacgagtcgcatgtgacggtgccgcaggtgggcgggatg
tacgagggcgacgcctcgcgtaagcgcaccctggtcgaccacggcttccggttgcccagt
gcgttggacaaccggccgctgacctgggaggagttctccgatcgcatcggtcagaccgtg
tacctctccgcaacgcccgggccgttcgagctcggccagacgggaggcgagttcgtcgag
caggtgattcgaccgacggggttggtcgacccgaaggtgctggtcaaacccaccgagggc
cagatcgacgatctggtgcacgagatccgggtgcgcgccgagcgcgatgagcgggtgctg
gtcaccacgctgacgaagaagatggccgaggacctgaccgactacctgctggaactgggc
atccgcgtccgctacctgcactcggaggtcgacacgctgcgccggatcgagctgttgcga
cagctgcgactcggcgagttcgacgtgctgatcgggatcaacctgctgcgcgagggactc
gacctgccggaggtctccctggtggcgatcctcgatgcggacaaggagggtttcctgcgg
tcggggaccagcttgatccagaccatcgggcgggcggcgcgcaacgtctccggcgaggtc
cacatgtacgccgaccggatcaccgactcgatgcaacgcgccatcgaggagaccgaccgc
aggcgggcgaagcagatcgcctacaacgaggaacggggcctggatccacagccgttgcgc
aagcggatcgccgacatcctcgatcaggtctacaccgaggccgaggacaccgcgggcagc
accgaggtcggtggacgcaacgcctcgcggggtcgcaaaccggtgggggagcgggggcag
ccacggggcagctcgggggtgctggtcgaccgcgacaccggctcgatgccgcgagcggag
ctggccgatctcgtccaacagctcaccgatcagatgatgagtgcggctcgcgagttgcag
ttcgaactggcgggtcgactgcgcgacgagatcgccgacctcaagaaggaacttcgggcg
atggacgcggcgggcttgtcctga
DBGET
integrated database retrieval system
