Azospirillum humicireducens: A6A40_05570
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Entry
A6A40_05570 CDS
T04409
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ahu
Azospirillum humicireducens
Pathway
ahu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ahu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A6A40_05570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ahu03400
]
A6A40_05570
DNA repair and recombination proteins [BR:
ahu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6A40_05570
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A6A40_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_22
UB2H
Kinesin
SWI2_SNF2
adh_short
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ANC91415
UniProt:
A0A160JEY7
LinkDB
All DBs
Position
complement(1225848..1227989)
Genome browser
AA seq
713 aa
AA seq
DB search
MASPVLSAIPARPLAKLEAGKQFVISSDFAPAGDQPNAIEELTAGLRQGEKDQVLLGVTG
SGKTFTMAHVIQTVQRPTLILAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYV
PRTDTYIEKESSINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSEMTVDLR
KGEVIAQPELLRKLTELQYKRNDAAFGRGLFRVRGDTVELFPAHMEDRAWRISLFGDEIE
AIHEIDPLTGEKLAALEAVRVYPNSHYVTPKPTLNQAINQIKKDLKDRLEEFAAEGKLLE
AQRLEQRTTFDIEMMAATGSCAGIENYSRYLTGRAAGDPPPTLFEYLPGDALLIVDESHV
MVPQIGGMYRGDLVRKSTLSDYGFRLPSAKDNRPLKFEEWEGMRPQTVFVSATPGPWELE
RTGGVFTEQLVRPTGLIDPPVIVRPTETQVDDLIGECKEVVAKGYRVLVTTLTKKMAEAL
TEYMHEAGLRVRYIHSDVETLERIEIIRDLRLGAYDVLVGINLLREGLDIPECALVAILD
ADKEGYLRSKTSLIQTIGRAARNVDGRAILYADKITDSMKYAIDETARRREKQMAYNLEH
GITPESVKKAIGDILESVFERGDHVTVKTGLNSNELVGHNLKSVIADLEKRMRAAAADLE
FEEAARLRDELRRLEAMDLGLETPGSIGISSARQGRGIPEGAPKKQGRRRRGP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtcccgtcctgtccgccattcccgccaggccccttgcgaagctggaagccgga
aagcagttcgtcatctcatcggatttcgcgcctgcgggcgaccagccgaacgcgatcgag
gagttgaccgccggactgcggcagggcgagaaggatcaggttcttctcggcgtcaccgga
tcgggcaagaccttcaccatggcgcacgtcatccagacggtgcagcgcccgacgctgatc
ctggcgcccaacaagactctggcagcgcagctgtatggcgagatgaagtccttcttcccg
aacaacgcggtggaatacttcgtctcctactacgactattaccagccggaagcctacgtc
ccgcgcaccgacacctatatcgagaaggaatcctcgatcaacgagcagatcgaccgcatg
cgccactcggcgacacgggccctgctggaacgggacgacgtcatcatcgtcgcatcggtg
tcctgcatctacggtatcggctcggtcgagacttactcggagatgacggtcgacctgcgc
aagggcgaggtgatcgcccagccggagctgctgcgcaagctgaccgagctgcaatacaag
cgcaacgacgccgccttcggccgcggcctgttccgcgtgcgcggcgacacggttgagctg
ttcccggcccacatggaagaccgcgcgtggcgcatctcgctgttcggcgacgagatcgag
gccatccacgagatcgacccgctgaccggcgagaagctggcggcgctggaggccgtgcgc
gtctatccgaacagccactatgtgacgccgaagccgacgctgaaccaggcgatcaaccag
atcaagaaggacctgaaggaccggctggaggagttcgccgccgagggcaagctgctggag
gcgcagcggctggaacagcgtaccaccttcgacatcgagatgatggcggcgaccggctcc
tgcgccggcatcgagaactattcccgctacctgaccggccgcgcagcgggcgatccgccg
ccgaccctgttcgagtatctgccgggcgatgcgctgctgatcgtcgacgagagccacgtc
atggtgccgcagatcggcggcatgtaccgtggcgaccttgtgcggaaatcgacgctgtcc
gattacggcttccgcttgcccagcgccaaggacaaccgcccgctcaagttcgaggaatgg
gagggcatgcgaccgcagacggtcttcgtctccgccacccccggcccgtgggaactggag
cgcaccggcggcgtcttcaccgagcagctggtccgcccgaccggcctgatcgacccaccg
gtgatcgtccgcccgaccgagacccaggtcgatgacctgatcggcgaatgcaaagaggtg
gtcgccaaaggctatcgcgtgctggtcaccaccctgaccaagaagatggcggaggcgctg
accgagtacatgcatgaggcgggcttgcgcgtccgctacatccactccgacgtggagacg
ctggagcgcatcgagatcatccgcgaccttcggctcggcgcctatgatgtgctggtcggt
atcaacctgctgcgcgaggggctggacatcccggaatgcgccctggtggcgatcctggac
gccgacaaggagggctatctgcgctccaagacctcgctgatccagaccatcggccgcgcg
gcgcgcaacgtcgatgggcgtgcgatcctctatgccgataaaatcaccgacagcatgaaa
tacgccatcgacgagactgcccgtcgccgtgagaagcagatggcctacaatctggagcat
gggatcacgccggaatcggtcaagaaagcgattggcgacattctggaaagcgtgttcgag
cgtggcgaccatgtgacggtgaagaccggcttgaattccaacgagctggtcgggcacaac
ctcaagagcgtcatcgccgatctcgaaaagcggatgcgcgccgccgctgccgacctggaa
ttcgaggaggcggcccgcctgcgcgacgaactgcgccggctggaggcgatggacctcgga
ctggaaacccccggcagcatcggcatcagcagcgcccgccaaggccgtggcatccccgaa
ggcgctccgaagaagcagggccggcgccggcgcggcccctga
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