Pseudalgibacter alginicilyticus: APS56_15340
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Entry
APS56_15340 CDS
T04100
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ahz
Pseudalgibacter alginicilyticus
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ahz03021
]
APS56_15340
Transcription machinery [BR:
ahz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APS56_15340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF2126
CCDC93_N
DUF1635
DUF3489
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALJ06425
UniProt:
A0A0P0D8H1
LinkDB
All DBs
Position
3673857..3674366
Genome browser
AA seq
169 aa
AA seq
DB search
MTQTEFLNIVMPFKDKVFRLAKRLLVSTEEAEDATQEVLLKLWNNKAKMQEYKNVEAFSM
TMTKNFCFDKLKSKQAQNLKIVHSNYEDKSMSLQKQVELNDSINWVEKIIEELPEQQRLI
IQLRDVEGYDYNDIVDILEMNATAVRVALSRARKTIREKLTIKHNYGVK
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacagagtttttaaatattgtaatgccttttaaagacaaggtatttcgttta
gcaaaacgattgttagtttctactgaggaagctgaagatgctacacaagaggttttgttg
aaattatggaataataaagccaaaatgcaagagtataaaaatgtggaggctttttctatg
acaatgactaaaaatttttgttttgataaattaaagtcaaaacaagcacaaaatttaaaa
attgtacatagtaattatgaagataaaagtatgtccttgcaaaaacaagttgaactgaat
gatagtattaactgggttgaaaaaattattgaggaattacctgagcagcaacgcttaatt
attcaactaagagatgtagaaggatatgattataatgacattgtagatatattagagatg
aatgctacagcagtgcgtgtagctttatctagagcacggaaaacaatacgagaaaaatta
accattaaacataattatggtgttaaatga
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