KEGG   Aequorivita iocasae: JK629_12170
Entry
JK629_12170       CDS       T07991                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
aic  Aequorivita iocasae
Pathway
aic03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JK629_12170 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aic03019]
    JK629_12170 (rny)
Messenger RNA biogenesis [BR:aic03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JK629_12170 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 PRD1_DD UPF0154
Other DBs
NCBI-ProteinID: QQX76079
LinkDB
Position
2647773..2649335
AA seq 520 aa
MDIITIVISAIVGIAIGFFIAKILERNNASQLIIRAKKSASSILKEAKSEAETIKKDKIL
QAKEKFLELKSEHEKVILNRDKKISEAEKRTRDKESQASSELAKLKKLNAELEEKKTDYD
ERISLLDKKQSEVEKLHRSQVEQLEVISSLSAEDAKAQLMESLKDEAKTQAMAYVQSSME
EAKMTAQQEAKKIIINTIQRIGTEEAVENCVSVFNLESDDVKGRIIGREGRNIRAIEAAT
GVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVQKTTKQIEEEII
EVGKRTVIDLGIHGLHPELIKAVGRMKYRSSYGQNLLHHSREVARLCGVMAAELGLNAKL
AKRAGLLHDIGKVPETETEMPHALLGMQWAEKYGEKPEVCNAIGAHHDEIEMTGLLSPIV
QVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVNKAYAIQAGRELRVMVESEKVS
DEKAAQLSFEISQKIQTDLTYPGQVKVTVIRETRAVNIAK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggacatcataactattgtaattagcgccatagttggtattgcgattggtttttttatt
gcaaaaatactcgagcgcaataacgcctcccaacttataataagagcaaaaaagagcgca
tcctcaatactgaaagaggcaaaatcagaagccgaaaccataaaaaaggataaaattctt
caggctaaagagaagtttttggaactgaagtcagagcacgaaaaagtaatccttaaccgt
gataaaaagatttcagaagcagaaaaaagaacacgcgataaagaatcacaagcttccagc
gaacttgcaaaattgaaaaaattaaatgctgagcttgaagaaaaaaagaccgattatgac
gagagaatttccttactcgacaaaaagcagagcgaagtagaaaagcttcaccgaagtcaa
gtggaacagttggaggtaattagcagtctttctgctgaagatgcaaaggcgcaactgatg
gaaagcttgaaagacgaagccaagacgcaggcaatggcatatgttcaatcttccatggaa
gaagcaaaaatgactgcccagcaagaggccaaaaaaattataatcaataccattcagcgt
ataggaacggaagaagcagtggaaaactgtgtatctgtgttcaatcttgaaagcgatgat
gtaaaaggtagaattattggacgtgaaggtagaaacatccgcgccattgaagctgccacg
ggcgtggagattattgttgacgatacaccagaggctatcattctttcctgttttgattcc
gtgagaagggaaattgcgcgattatcacttcacaaattggttaccgatgggcgtattcac
ccggcacgtattgaagaggtggttcaaaaaaccaccaaacaaattgaagaggagattatt
gaagtgggaaaaagaaccgttatcgatttgggaatacacggtctgcaccccgaacttata
aaagccgtgggacgtatgaaatatcgatcttcttacggtcaaaatcttttgcaccactcg
cgcgaagtggcaagactttgtggtgtaatggctgcggagcttggactgaacgccaaattg
gcaaaacgggctggattgttgcacgatattggaaaagttcctgaaacggaaactgaaatg
ccacacgcacttttaggaatgcaatgggccgaaaagtatggagaaaaaccagaggtttgc
aatgcaattggagcccaccacgatgaaattgaaatgaccggattgctctctccaattgtt
caagtttgcgatgctatcagcggtgcaagaccgggtgcaagacgccaagtgctggatagt
tatattcagcggttgaaagatttggaagatattgctttcggatttggtggcgtaaataaa
gcatatgcaatccaagcagggcgagagcttcgtgtaatggttgaaagtgaaaaagtgagt
gatgaaaaggcagcccagctttcttttgaaatttcacaaaaaatccaaacagacctgacc
tatcctggacaggtgaaagtcactgttattcgcgaaacacgtgctgtgaacattgcaaaa
taa

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