Aequorivita iocasae: JK629_12170
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Entry
JK629_12170 CDS
T07991
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
aic
Aequorivita iocasae
Pathway
aic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JK629_12170 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aic03019
]
JK629_12170 (rny)
Messenger RNA biogenesis [BR:
aic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JK629_12170 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
PRD1_DD
UPF0154
Motif
Other DBs
NCBI-ProteinID:
QQX76079
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All DBs
Position
2647773..2649335
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AA seq
520 aa
AA seq
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MDIITIVISAIVGIAIGFFIAKILERNNASQLIIRAKKSASSILKEAKSEAETIKKDKIL
QAKEKFLELKSEHEKVILNRDKKISEAEKRTRDKESQASSELAKLKKLNAELEEKKTDYD
ERISLLDKKQSEVEKLHRSQVEQLEVISSLSAEDAKAQLMESLKDEAKTQAMAYVQSSME
EAKMTAQQEAKKIIINTIQRIGTEEAVENCVSVFNLESDDVKGRIIGREGRNIRAIEAAT
GVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVQKTTKQIEEEII
EVGKRTVIDLGIHGLHPELIKAVGRMKYRSSYGQNLLHHSREVARLCGVMAAELGLNAKL
AKRAGLLHDIGKVPETETEMPHALLGMQWAEKYGEKPEVCNAIGAHHDEIEMTGLLSPIV
QVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVNKAYAIQAGRELRVMVESEKVS
DEKAAQLSFEISQKIQTDLTYPGQVKVTVIRETRAVNIAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacatcataactattgtaattagcgccatagttggtattgcgattggtttttttatt
gcaaaaatactcgagcgcaataacgcctcccaacttataataagagcaaaaaagagcgca
tcctcaatactgaaagaggcaaaatcagaagccgaaaccataaaaaaggataaaattctt
caggctaaagagaagtttttggaactgaagtcagagcacgaaaaagtaatccttaaccgt
gataaaaagatttcagaagcagaaaaaagaacacgcgataaagaatcacaagcttccagc
gaacttgcaaaattgaaaaaattaaatgctgagcttgaagaaaaaaagaccgattatgac
gagagaatttccttactcgacaaaaagcagagcgaagtagaaaagcttcaccgaagtcaa
gtggaacagttggaggtaattagcagtctttctgctgaagatgcaaaggcgcaactgatg
gaaagcttgaaagacgaagccaagacgcaggcaatggcatatgttcaatcttccatggaa
gaagcaaaaatgactgcccagcaagaggccaaaaaaattataatcaataccattcagcgt
ataggaacggaagaagcagtggaaaactgtgtatctgtgttcaatcttgaaagcgatgat
gtaaaaggtagaattattggacgtgaaggtagaaacatccgcgccattgaagctgccacg
ggcgtggagattattgttgacgatacaccagaggctatcattctttcctgttttgattcc
gtgagaagggaaattgcgcgattatcacttcacaaattggttaccgatgggcgtattcac
ccggcacgtattgaagaggtggttcaaaaaaccaccaaacaaattgaagaggagattatt
gaagtgggaaaaagaaccgttatcgatttgggaatacacggtctgcaccccgaacttata
aaagccgtgggacgtatgaaatatcgatcttcttacggtcaaaatcttttgcaccactcg
cgcgaagtggcaagactttgtggtgtaatggctgcggagcttggactgaacgccaaattg
gcaaaacgggctggattgttgcacgatattggaaaagttcctgaaacggaaactgaaatg
ccacacgcacttttaggaatgcaatgggccgaaaagtatggagaaaaaccagaggtttgc
aatgcaattggagcccaccacgatgaaattgaaatgaccggattgctctctccaattgtt
caagtttgcgatgctatcagcggtgcaagaccgggtgcaagacgccaagtgctggatagt
tatattcagcggttgaaagatttggaagatattgctttcggatttggtggcgtaaataaa
gcatatgcaatccaagcagggcgagagcttcgtgtaatggttgaaagtgaaaaagtgagt
gatgaaaaggcagcccagctttcttttgaaatttcacaaaaaatccaaacagacctgacc
tatcctggacaggtgaaagtcactgttattcgcgaaacacgtgctgtgaacattgcaaaa
taa
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