Actinobacillus indolicus: EXH44_02945
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Entry
EXH44_02945 CDS
T05940
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aio
Actinobacillus indolicus
Pathway
aio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EXH44_02945 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aio03400
]
EXH44_02945 (recB)
Enzymes [BR:
aio01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EXH44_02945 (recB)
DNA repair and recombination proteins [BR:
aio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXH44_02945 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_12
AAA_30
AAA_25
ResIII
DEAD
Microtub_bd
DUF3725
Motif
Other DBs
NCBI-ProteinID:
QBQ64730
UniProt:
A0A4V1AYA9
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All DBs
Position
615021..618620
Genome browser
AA seq
1199 aa
AA seq
DB search
MKTLDALRLPLNQSCLIEASAGTGKTYTMANLYLRLILGVGCAPLTVEQILVVTFTKAAT
QELRDRIRKRLANVGKWFKDPDTDKAQKEFGKDPFLKDLYLDIQPRLNEALLRLKIAERE
MDLASIFTIDSFCQKMLFQFAFDSGVRFDIDLLTNESELLNRLSEETWRELFYPMGLEES
ALINKEVKSPASALNEIKNYLYKNQLQLSIEQKWMNNDFSTFVAEYQSFLTEIKRHWLSI
VEESRALILNEIHETKLSRGSYKVEKVEAWICDLNKWATGSSIEFPYESFIYFCQDCVIS
ATKKAFTPLQHPILEQNQAFLTHYQEHFKAQQETLKAFLHYKFLMHLRQKLTDYKQTHKE
KSFGDMLSFLLSALQSERGDTLAQQIRALYPFAMIDEFQDTNQQQYEVFQRIFMGQNSSG
QGFIMIGDPKQSIYKFRGADIFTYLKAKNEVQEQATLDRNWRSVPEVVDSCNRLFQFPEG
SHHPFLYKDIPFQPVKAKDNAEKLIGEQATRYFLISTEFKEQLAAEHCAYQIQQQLKKSE
QGLITLPKEKKEDEKKESEYRPLEAKDITILVRSHKQASLIRAELLKRHIPSVFFSERNS
VYETQEAQDLRFILSACLNPYRQSSLLSAIGTSLWGLTSTDIFNIKQDEKAWDNVVETFV
GYQQVWLHQGILPMLHQIFVKENIIQRINALPNAERRITDLLHLAELLQGAMPNLENESA
LLRWYEQQLDNPDGYADEQKQRLESEESLVKVVTIHGSKGLEYPVVWLPFVAKASQPAKS
KSMAIYQDKDGNAHWSFGSQSSEIKSYINRAEFSEGLRLLYVAITRAKYQLNCILPAQFD
KNWNGMSYLLTNGEIELGGKAPSQTTESYIEHKGIQAEIFSLENDIPEDDWQPTLVQPID
IEAKSFTGTIRTVGQITSFTALQAQNERLQNKGQNTPLATFGDEAQDYDRTEFIVSDFLE
ENAQPYSRYQFPHSTKVGNLLHKFFEHWDFQQAVDQTQLQTLCEQLDLDEAWLEPLTRWF
EQVIQTPFGEQAVSLAQIFTNKRLNEWQFYLRLSNKEALYRLNQLLKKHSPLAKQLPDLT
LYNLEGFVRGFVDCIAQIDGKFYVIDYKSNFLGYLPQDYQAEKLAKTMGQFRYDLQYLLY
TLAVHRYLSARLGENYDYEQHFGGVAYLFLRGMNGEANSGVYFDKPSQELIEEMDQLFG
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttagatgcgctacgtttacctttaaatcaatcctgtttaattgaagcttct
gcgggcacgggcaaaacctatacgatggcaaatttatatttgcgtttgattttaggtgtt
ggctgtgcgcctttaaccgttgagcaaattcttgtagtgacctttaccaaggcagcgaca
caagagcttcgtgatcggattcgtaaaagactcgccaatgtaggaaaatggtttaaagat
ccagacacagataaggcacaaaaagaatttggcaaagatccgtttcttaaagatctttat
ctcgatattcaaccacgtttaaatgaagcgttattacgcttaaaaatcgcagagcgtgag
atggatttagccagtatttttacgattgatagcttctgtcaaaagatgttattccagttt
gcctttgattctggcgttcgttttgatattgatttattgacgaacgaaagcgaactgctt
aatcgtttgagtgaagaaacgtggcgagagctgttttatccaatgggattagaagaaagc
gcacttataaataaagaagtaaaaagtccagcaagtgcacttaatgaaataaaaaactat
ctttataaaaatcaactccaacttagcattgaacaaaagtggatgaataatgatttttca
acctttgtggcagaatatcaaagcttcttaacagaaattaaaagacattggttatctatt
gtggaagaatctcgtgcactgattttaaatgagattcatgaaaccaaactttctcgaggg
agttataaggtagagaaagtggaagcgtggatttgtgatcttaataaatgggcaactgga
agttccattgaatttccttatgaaagttttatttatttttgccaagattgcgttatatct
gcaacgaaaaaagcatttacgccacttcagcacccgattttagagcaaaatcaggctttt
ttaactcattatcaagagcactttaaagctcaacaagagacactaaaagctttcttacat
tataaattcttaatgcatctacgccaaaaactcaccgattataagcaaacgcataaagag
aaaagttttggcgatatgttgagctttttgctctccgccttgcaatcagagcgtggggat
accttagcccaacaaatccgagccttgtacccgtttgcgatgattgatgaattccaagat
acgaaccaacagcaatatgaagtgtttcagcgtatctttatggggcaaaatagtagcgga
caaggttttattatgatcggcgatccaaaacagtcgatctataaattccgtggtgctgat
attttcacctatttaaaagcgaagaatgaagttcaggaacaagcaacccttgaccgtaac
tggcgatctgtgcctgaagtagtggatagttgcaatcgtttatttcagtttccagaagga
agccatcatccatttttatataaagatattccattccagcctgttaaggctaaagacaat
gctgaaaaattaattggcgaacaagcaacccgatatttcttaatttccacagaatttaaa
gaacagcttgctgcggagcattgtgcttaccaaattcaacaacagctgaaaaaaagtgag
caaggtttaattaccttaccaaaagaaaaaaaagaagatgaaaaaaaagaaagtgaatat
cgaccgctcgaagcgaaagacattacgatccttgtgcgtagccataaacaagctagctta
atccgagcagaattattaaaacgccatattccatcagtctttttctctgaacgaaacagc
gtctatgaaacccaagaagcacaagatttacgctttattctttctgcgtgtttaaaccct
tatcgtcaatccagcttgctttcagccattggcacatcgctttggggcttaacatcgacc
gatatttttaatatcaaacaagatgaaaaagcgtgggataatgtggtggaaacctttgtg
ggctatcaacaagtttggctacatcaggggattttaccgatgttgcaccaaatttttgtg
aaagagaatattatccaacggatcaatgctttaccgaatgcagaacgtcgcattaccgat
ctgttgcatttagccgaactactacaaggggcaatgccaaatttagagaacgaatctgcc
ttgctacgttggtatgaacaacaattagataatcccgatggctacgccgatgaacaaaaa
cagcgtttagagagcgaagagagtttggtcaaagtcgtgactattcacggctcaaaaggg
ttggaataccctgtggtttggttgccatttgtggctaaagcaagccaacctgctaaaagt
aaatcaatggctatctatcaggataaagacggcaatgctcattggagttttggttctcaa
tcgagtgaaattaaaagctatatcaatagagcagagttttccgaaggcttacgattactt
tatgtggcaatcacacgagccaaatatcaattaaattgtatattacctgcccaatttgat
aaaaattggaatggtatgagttatttactcacaaatggtgaaattgaattaggcggaaaa
gcaccgagtcaaacgacagaaagttatattgagcataaagggatacaagccgagatcttt
tctcttgagaatgatattcctgaagacgattggcaaccaacactcgtacaacctattgat
attgaagccaaatcctttactggcacaattcgcaccgttgggcaaattactagctttacg
gcattacaggctcaaaatgaacgtttgcaaaataaagggcaaaacacaccgcttgctact
tttggtgacgaagctcaagattatgaccgcacagagttcatcgtatcagattttcttgaa
gagaacgctcagccatatagtcgttaccaatttccacatagcacgaaagtcggtaatctg
ttgcataaattctttgagcattgggattttcaacaagcggtggatcaaacgcaattacaa
acattgtgtgaacaacttgatttagacgaagcgtggcttgagcctttaacaaggtggttt
gagcaagttattcaaaccccatttggtgaacaagcggtcagtttagcgcagatttttaca
aataaacgcttgaacgaatggcaattttatttacgcttatcaaacaaagaagccttatat
cgactgaatcagctactgaaaaaacatagccccttagccaaacagttgcctgatttgacc
ttatataacctagaaggctttgtgcgtggttttgtcgattgtattgcccaaattgacggc
aagttctatgtaattgactataaatccaattttttaggctatctgccacaagattatcaa
gccgaaaaattagccaaaacaatggggcaattccgctatgatttgcaatatttactctat
acccttgccgttcaccgctatttaagcgctcgcttaggggaaaattatgactacgagcag
cactttggcggtgtggcttatttattcctacgaggaatgaatggtgaagcaaatagcggt
gtttattttgataaaccaagtcaggagttgattgaagagatggatcaattgtttgggtaa
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