Amycolatopsis japonica: AJAP_16790 Help Entry AJAP_16790        CDS       T03225                                  Name (GenBank) Hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism aja  Amycolatopsis japonica Pathway aja03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:aja00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     AJAP_16790  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:aja03400]     AJAP_16790 Enzymes [BR:aja01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      AJAP_16790 DNA repair and recombination proteins [BR:aja03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      AJAP_16790 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_N DNA_ligase_A_C DNA_ligase_A_M Motif Other DBs NCBI-ProteinID:  AIG76226 UniProt:  A0A075UV23 LinkDB All DBs Position complement(3540981..3542417) Genome browser AA seq 478 aa AA seqDB search MAEKLGEYRRKRRPGRTPEPLPDHDGKSGADDLFVIQEHHASSLHWDIRLERDGVLVSWA VPKGLPMAPDQERLAVHTEDHPMEYLTFEGEIPAGEYGGGTMTIWDTGRYETLHFNDHKV EVVFHGARARGKYLFLNVKKDGRDNGWLLKRLDPADPGRKELPSFLAPMLTKPGRLPSTG EDPEWAYEFDWSGRRTLIRVSGGRITAYDDSGDDVTGLYPEFRGLGEQLGATEVFLDGEI VVFDGGKPSAEGLGHRARATKNSAKRLTSRYPAFYLVNDLVHLDGRSCVGTPYVERRELL DELGLAGPHWQVPRYYLGDGGAVARAAREHGLAGVVAKRADSAYHPGKRTGEWLSITGTL VQQVVLGGWRPGGGSRAGTFSSLLLGVPHEDGLQYIGNCGVGFAGDELEELSKQLFRLER KTSPFHSVPDKQARDARWSRPTIVGEVVFGGWTDAGCLRNPRWRGLLPDVSADEVELD NT seq 1437 nt NT seq  +upstreamnt  +downstreamnt atggcggagaaactcggcgaataccgccgtaagcgcagacctgggcgaactcccgaaccc ctgccggatcacgacgggaagtccggggccgacgatctcttcgtcatccaggaacatcac gcgagcagcctgcactgggacatccgcctcgaacgggacggggtcctcgtctcctgggcg gtgccgaagggcctgccgatggcgcccgaccaggagcgcctggccgtgcacaccgaagac cacccgatggaatacctcaccttcgaaggcgagatcccggcgggcgaatacggcggcggc accatgaccatctgggacaccggccggtacgaaacgctgcacttcaacgaccacaaggtc gaagtcgtcttccacggcgcacgggcacgcgggaaatacctgttcctcaacgtgaagaag gacggacgggacaacggctggctgctcaaacggctcgaccccgccgaccccggccggaag gaactcccctctttcctcgccccgatgctgaccaaaccgggccgtctcccgtcgaccggc gaagacccggaatgggcttacgaattcgactggtccgggcgccgcacgctgatccgcgta tccgggggccggatcaccgcctacgacgattcgggcgacgacgtcaccgggctgtatccc gaattccgcggtctcggcgaacaactcggggccacggaagtcttcctcgacggggaaatc gtcgtcttcgacggcggcaagccgagcgcggaagggctagggcaccgcgcgcgggcgacg aagaactcggccaaacggctcacctcacggtatccggcgttctacctggtgaacgatctc gtgcatctcgacggccgctcgtgtgtcgggacgccctatgtcgaacgacgggaactgctc gacgaactcgggctcgccggaccgcactggcaggttccccggtactacctcggtgacggt ggcgcggtcgcgagggcggctcgcgaacacggactcgccggcgtcgtcgccaaacgggcc gactccgcgtaccaccccggaaagcgcaccggggaatggctttccatcacgggaaccctg gtgcagcaagtggtactgggcggctggcggccgggtggcggcagccgggccggcacgttc agctcgctgttgctcggcgtcccgcacgaagacggcttgcagtacatcggaaactgcggt gtcggcttcgcgggtgacgagctggaggaactctccaaacagctgttccgcttggagcgc aagacatccccgttccattccgttccggacaaacaggctcgggacgcgcgctggtcgcgg ccgaccatcgtcggcgaggtcgtcttcggcggctggaccgacgcgggctgcctgcgcaat ccgcggtggcgtggcctgctgccggacgtctccgccgacgaggtcgagctcgactag

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