Amycolatopsis japonica: AJAP_26270
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Entry
AJAP_26270 CDS
T03225
Symbol
sigM
Name
(GenBank) ECF subfamily RNA polymerase sigma-70 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
aja
Amycolatopsis japonica
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aja03021
]
AJAP_26270 (sigM)
Transcription machinery [BR:
aja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AJAP_26270 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
HTH_38
HTH_Tnp_ISL3
HTH_Tnp_1
DUF2089
HTH_23
DUF1804
HTH_17
HTH_28
HTH_30
DUF742
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AIG78101
UniProt:
A0A075V0B9
LinkDB
All DBs
Position
complement(5633512..5633955)
Genome browser
AA seq
147 aa
AA seq
DB search
MAFVLKLTGHDRQWAEDVVQETLIKAWRNAGKLDRQPEMLRAWLFTVARRIVIDGWRSRS
ARPQEVEELESDSIGVPDESEKTLAAMIVYEALRNLSPEQREAVQQTYLRDRTVNEVAAT
LGVPPGTVKSRIHHAVRALRRALQERG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgtgctgaagctgaccggtcacgatcgccagtgggccgaggacgtggtccag
gagacgctcatcaaggcgtggcgcaacgccggcaaactcgaccggcagccggaaatgctg
cgtgcgtggctgttcaccgtggccaggcgcatcgtcatcgacggctggcggagccggagt
gcccgccctcaagaggtggaggaactggagtcggattcgatcggagtgccggacgaatcg
gagaagacgctcgcggccatgatcgtttacgaggccctgcgcaatctttccccggaacaa
cgtgaagccgtccagcagacctacctgcgtgaccgcaccgtgaacgaggtcgcggcgacg
ctgggggttccgccgggtacggtgaaatcgcggatccaccacgctgtgcgcgcgctgcgc
agggcgctgcaggagcgggggtga
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