Amycolatopsis japonica: AJAP_28710
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Entry
AJAP_28710 CDS
T03225
Name
(GenBank) Hypothetical protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
aja
Amycolatopsis japonica
Brite
KEGG Orthology (KO) [BR:
aja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aja03021
]
AJAP_28710
Transcription machinery [BR:
aja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AJAP_28710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_AsnC-type
DUF3489
HTH_16
Bac_DnaA_C
HTH_23
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AIG78578
UniProt:
A0A075V008
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All DBs
Position
6107656..6108237
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AA seq
193 aa
AA seq
DB search
MTTSARTEPLAAGETVLDDATLVARARDGEIRAYEQLVLRFQGPMYRLALRMLGNKGDAE
DVVQEVFLVAWRRLDQLQEDAAFVGWLYRMTTNRCLNVIRARKPVADVELDQQESTGSAG
RPDRAAETSAQMTALTGALDQLTAEQRACWLLREVHGRSYEEIAKAIGATTTAVRGRIAR
ARAQLAEVMAPWR
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcagcgagaacagagccgctcgcggccggcgaaacggtgctggacgacgcg
acgctggtggcgcgcgcccgcgacggtgagatccgcgcgtacgagcagctcgtcctgcgg
ttccaggggccgatgtaccggctggcgctgcggatgctggggaacaagggcgacgccgaa
gacgtcgtccaggaggtgttcctcgtcgcctggcggcggctcgaccagttgcaggaggac
gcggcgttcgtcggctggctctaccggatgacgaccaaccggtgcctgaacgtgatccgc
gccaggaagccggtggccgacgtcgaactggaccagcaggagtccaccggttcggcgggc
cgtccggaccgcgcggccgagacgagcgcgcagatgacggcgctcaccggggcgctggac
cagctgaccgccgagcaacgggcctgctggctgttgcgcgaggtccacggtcgctcctac
gaggagatcgcgaaggcgatcggggcgaccaccaccgcggtgcgcggacgcatcgcgcga
gcacgagcacagttggcggaggtgatggcgccatggcgatga
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