Histoplasma mississippiense: HCAG_02489
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Entry
HCAG_02489 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
aje
Histoplasma mississippiense
Pathway
aje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCAG_02489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_02489
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HCAG_02489
mRNA degradation factors
5'-3' decay
Decapping complex
HCAG_02489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YjeF_N
FDF
NTP_transferase
Motif
Other DBs
NCBI-GeneID:
5448610
NCBI-ProteinID:
XP_001542318
LinkDB
All DBs
AA seq
761 aa
AA seq
DB search
MAADFVGYTVLVTLKSPPDSQVQGVVADVAGQRLTLQHATLLWSGQHIPLYHIDAPGIAD
LELSSHQIPNPPAAANYGTTAHTSFHNGSTLPPSQRPSQLPQRRQENAVETVSLESRPQA
FVDPAILSFQKPSKNSSISTTNIHLNTGKRDATSPVMIADSESSARSGAKSMVSTAITPT
GPKHAEVDDATATLSEPFNNLSFNEGSTEDQGTQVEQAESSIPEGRKGAGPLEAPLKYTG
KRSRRGGRNKMNKDAAVQSSGVDAITENPTATTGSSRSPVPGKGWRKTAFVEPARNPSPQ
KLNNGRARRSKVRSKKSFAEDPSGWATEDATDIQEMGDFDFASNLSKFDKRRVFDEIRND
DTTTGEERLVSFNRRVQRPGTNDGRNLHYTENVLDDTPSNDKWNSEAGETDDDEASEERF
SSGKNSARARSRVCVSARAQSRKGSMILGSTLVSSQISSLSRGQMTGSRTESPQPHKSSP
LIGSGSSSTGSLLLAATKRPCPCVGPLQMIEIEQLAITELGLGEDIITENAGRGIAEAAV
FQVSKLAISSTILVLAGNHRTGSRAICAARHFRNRGYRVTLCVLGLDREDEFMDGVRKQI
DIFKKVTGRVMKWEEISTRLTSGDYVPDLVIDALFGVHIAFDDLRTDDQATAFEMISWAN
RNNVEILSVDVPSGLSAVSGEATLVQGSRLSVNSKFIVCLAAPKTGLVHALGSGEGLAWN
ITVADIGISQVVWKKYGSRRRHGVDFGNQWIVPLRFQTPTP
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggactttgtgggatataccgttctggttacgctcaagtcaccaccagactca
caggttcaaggggtggttgctgatgttgcgggacagcgactaacgcttcaacatgcaacg
ctactatggagtgggcagcatattccgctgtaccatattgacgctccaggcatcgcagat
ctagaattgtcttcccaccaaataccgaaccctcccgcagccgccaactacggaactaca
gcccatacgtccttccataatggtagcacgctgcctccttcacaacgcccgtcgcaactt
ccgcaacgcaggcaggaaaatgcggttgagaccgtgtcgctagaatcccggcctcaagcg
tttgttgaccccgcgatactaagtttccaaaaaccctctaaaaattcgtcaatttcgacc
acgaacatacatttaaatactggcaaacgagacgccacttctccagttatgattgctgat
tcggagtcttccgcccgctctggcgcaaagtctatggtttccactgccataactccaact
ggcccaaaacatgcggaggtagatgatgcaacagcaacactcagcgagccatttaacaac
ctgagtttcaacgaaggatcgacggaggatcagggtacacaagtggaacaggcggagtcg
agtattccagaaggccgtaagggtgcagggcctctggaagcgccgctcaagtataccgga
aaacgtagtcgaaggggcggaaggaacaagatgaataaagacgcagctgtgcaatcttcc
ggcgttgacgcaataacggaaaaccctactgccacgacaggttcgtcgagatcccctgtt
ccagggaagggttggcgtaagactgcgtttgttgaaccagcccgcaatccgtctccacaa
aagctcaataatgggcgagccaggcggtctaaagtaaggagcaagaaatcatttgctgag
gacccgagtggatgggcaacggaggacgcaacggacattcaggagatgggagatttcgat
ttcgccagtaatctatcaaagttcgataagcgtcgtgttttcgacgagattcgcaatgat
gatactaccactggcgaagaacgattggtcagtttcaacaggagagttcaaagaccaggg
acgaacgatggcagaaatttacactacacggagaatgtccttgatgacactccatcgaac
gataaatggaatagtgaagcaggggaaacggacgacgatgaagccagcgaagagcgtttc
agtagcggaaaaaattccgcgagagctaggtcgagagtatgcgtatctgcccgtgcacaa
tctcgaaaagggagtatgattctcggatcgactcttgtatcttctcagatcagctcctta
tctcgtggccaaatgacaggttctcgtaccgaaagtccgcaaccacacaagagttcgcct
ttaataggatcgggctcgtcatcaactggttctttgctgctggcagcaacaaaacggcca
tgcccctgtgtcggtccactccaaatgattgagatagagcagttggccattacggaactt
ggtttgggagaagacattattacggaaaacgctggacgaggcattgctgaggctgcagtg
tttcaagtctccaaacttgcgatttcatccaccatattagttttagctgggaatcaccga
actggcagtcgtgctatatgtgccgctcgacatttccgtaatcggggatatcgagtaacg
ctttgtgtccttggcttggatcgggaagacgagttcatggatggtgtacggaaacagatc
gacatcttcaaaaaggttaccggaagagtcatgaaatgggaagaaatatcaacgcgattg
acctctggtgattacgttcccgaccttgtaatagatgccttatttggtgttcatattgct
tttgatgacctacgaactgacgaccaagcgactgcctttgaaatgatctcgtgggctaat
cgcaacaatgttgaaattttgtccgtggatgtcccatcgggtctctctgctgtatcaggc
gaagcaacgctcgttcaaggttctcgattgagtgtcaattcaaaattcatcgtttgcctt
gcagcacccaaaaccgggcttgttcatgcgcttgggtccggcgaaggactagcctggaac
atcacagttgcagatattggtatcagccaagttgtatggaagaaatatggtagtcgacgg
cgacatggtgttgactttgggaatcaatggatcgtccccctccgattccaaacgccaacg
ccctga
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integrated database retrieval system