Histoplasma mississippiense: HCAG_07349
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Entry
HCAG_07349 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K15542
polyadenylation factor subunit 2
Organism
aje
Histoplasma mississippiense
Pathway
aje03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HCAG_07349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_07349
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
HCAG_07349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
5444011
NCBI-ProteinID:
XP_001537927
LinkDB
All DBs
AA seq
619 aa
AA seq
DB search
MSSYDHDAAEGSFPRPLRSYEGGVGGPRRPRPVTDYGSSMVQWMRVRQPRYKGSHRLERE
RPSASYTVDMLPPLARIDSPADTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGE
FMLWNGTAFNFETVMDGDIKYWRPNFNNVETVDDAHHDAVRDLSWCPSDTKFVSASDDTT
LKIFYFTARMCELVLTGHGWDAKSCDWHPSKGLLVSGSKDHQVKFWDPRTGRCLTTLHSR
KNTVTWTRFSRVNSNLVATSSRDHCARVFDLRMMRDICILRGHEKPISSMTWHPIHSSLI
STGSEDGSIHHYLLDEQNLPAGQVPTVAPYDSADPANTPAQLIFPAHRIPYAHSSTIWTL
DWHPLGHILASGSKDNFTRFWSRARPGETSYLKDRFHIGEEAAEAQGTWSRGFGRRQMKE
EEEQELQDEAEGLVDQKKRDASVLLGIQGVPGVGDNVGLPGLIPGIGAVQPPPPPPSGTV
SSMSQVEPSRLAAMISSGSFPPPQLESLPPNLRPPAYPMPGMQGGGFVPHMDLSSLQNQF
FSPQQQHQQQSYTLQQNQNFPTQGGGGFTSSGIPGLQGQAPTGDPNEDFTNGIRKRGPLP
SQQDSLMEEQRRGNWRNIR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttacgaccacgatgctgcggaggggtcattcccacgcccgctgaggtcatac
gagggaggggtgggaggtccccgaagacccagacctgtgaccgactatggctcgtcaatg
gtgcagtggatgcgggtgcgccagcctcgatacaaaggatcacataggttggaacgtgaa
agaccaagcgccagctacactgtggatatgctccctcccttggcccgaatcgattcacct
gctgacaccatccccgttcgtcatctccaccaatcaatcggtaaatcgaagaagcctatt
acggtcgtcagatggacgccggagggacgacggttgttgacaggaggtcacactggcgag
ttcatgctatggaatggtacagcattcaatttcgaaacggttatggatggagacatcaag
tactggcggcccaacttcaacaacgtcgaaaccgtcgacgacgcccaccacgacgccgtc
agggatttgtcgtggtgtccaagcgatacgaaattcgtctctgcctctgacgacacgaca
ctaaagatcttctacttcaccgcccgcatgtgcgagctggtgctgacgggccacggctgg
gatgcaaagtcgtgcgattggcatccgtccaagggcctcctagtctccggatccaaggac
caccaggtcaagttttgggacccccgcaccggccggtgtttgactaccctccacagccgt
aagaatacagtcacttggactagattctcgcgtgtgaacagtaacctagtggcgacatca
tcccgggaccattgcgcccgcgtcttcgatctacggatgatgcgagacatatgcatttta
cgaggacatgagaagccgatatcttccatgacgtggcacccgattcatagttcgcttatc
tctacgggaagtgaagatggttcaattcatcattatttattggatgagcagaatctacct
gctgggcaggtccccactgtcgcgccatacgacagcgctgatcctgctaatacccccgcc
caacttatattccccgctcatcgtattccctatgcccattcgtctactatatggaccctc
gactggcatcccctcggccacattctggcgtccggctccaaggataattttacccgattt
tggtcccgcgcccgacccggcgaaaccagctatctgaaggatagattccacattggcgaa
gaagccgcagaagcccagggaacttggagccgtggctttggccgtcgacagatgaaggaa
gaagaggagcaggaacttcaagatgaggcggagggacttgttgaccagaagaagcgcgat
gcttcagttctcctcggaatccagggtgttcccggggttggggataatgtcgggcttcca
gggctgataccaggaattggggcagttcagccacccccgccacccccttcaggtacggtt
tcatccatgtcgcaagtcgaaccgagccgtctggcggcgatgatatcctccggctcgttt
cctccgccacaactcgaatccttaccaccaaacttacgtccgccggcatatcccatgcct
ggtatgcagggaggtggtttcgtcccacatatggatctatcatccttacaaaaccagttc
ttttctccacaacaacagcaccagcagcaatcctacacgttgcagcaaaaccaaaacttt
cctacgcagggtggcggaggcttcacgtcttcaggaatccccggtcttcagggccaagcc
ccaaccggcgaccccaatgaggatttcacgaatggaataaggaaacgcgggcctttgcca
agccagcaagatagcttgatggaagaacaacgacggggaaactggcgaaatattagataa
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integrated database retrieval system