Artibeus jamaicensis (Jamaican fruit-eating bat): 119037629
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Entry
119037629 CDS
T07223
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03440
Homologous recombination
ajm03450
Non-homologous end-joining
ajm04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119037629 (RAD50)
03450 Non-homologous end-joining
119037629 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
119037629 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ajm03032
]
119037629 (RAD50)
03400 DNA repair and recombination proteins [BR:
ajm03400
]
119037629 (RAD50)
DNA replication proteins [BR:
ajm03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119037629 (RAD50)
DNA repair and recombination proteins [BR:
ajm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119037629 (RAD50)
BRCA1-C complex
119037629 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
119037629 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
Crescentin
DUF1664
AAA_29
DUF2703
Motif
Other DBs
NCBI-GeneID:
119037629
NCBI-ProteinID:
XP_036985787
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNSELVAVQRSMVCTQKGRKTEFKTLEGVITR
TKHGERVSLSSKCAELDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVRECQTELKYLKQNKEEACEIRDQITSKEAQLTSSKEI
VRSYENELDPLKTRLKEIEQNLSKIMKLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QENIRARDSLIQSLAIQLELDGFERGPFSERQIKNFHKLVRERQEKEEETAHQLMNDFAE
KETLKQKQIDEIRDKKIGLGRIIELKSEILSKKQNELKNVKCELQQLEGSSDRILELDQE
LTKAEHELSKAEKNSNVETLKAEVTSLQNEKADLDRIVRKLDQEMEQLNHHTTTRTQLEM
LTKDKADKDEQIRKIKSRHSDELNSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSNYEDKLFDVCGSQDFESDLDKLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEMPELRNRLQSVNRDIQRLKNDIEEQETLLGAIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKFIQDQQEQIQHLRSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQISPLETTLDKFHQEKEEIICKKTTNIKITQDKINDIKEKVKNIHGYMKN
IENYIQDGKDDYKKQKETELNKVIAQLSESEKHHEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKRHLKEMGQMQVLQMRNEHQNLEEKIDNIKRNHSLAIGRQKG
YEDEIIHFKKELQKPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENLSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVKCSVNSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagtcccctcacaattttggttggccccaatggggcg
gggaagacgaccattattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttcgagcc
cagattcgcctgcagttccgcgatgtcaacagcgagcttgtggctgtgcagcggtccatg
gtgtgcactcagaagggcagaaagaccgagtttaaaaccctggagggggtcattaccagg
acaaagcatggtgaaagggtcagtctcagctctaagtgtgcggaacttgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgttattttctgtcatcaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgaaattttt
tcagcaacaaggtacattaaagccttggaaacacttcgacaggtgcgccagacacaaggt
cagaaagtaagagaatgtcaaacagaactaaaatatctgaagcaaaataaggaagaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttaacatcttcaaaggaaatt
gtcagatcgtatgagaatgaacttgatccattgaagactcgtctaaaagaaattgaacaa
aatctctctaaaataatgaaacttgataatgaaattaaagccttggaaagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggaaaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatcgaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagctgcaagcggatcggcat
caagaaaacatccgtgctagagattcattaattcagtctttggcaatacagttagaattg
gatggctttgagcgtggaccattcagtgaaagacagattaagaactttcacaaacttgtg
agagagagacaagaaaaggaagaagaaactgcccaccaactgatgaatgactttgcagag
aaagaaactctgaaacaaaaacagatagatgagataagggataagaaaattggactggga
agaataattgagctaaaatcagaaatcctcagtaagaagcagaacgagctgaaaaatgtg
aagtgcgaattacagcaattggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacatgagcttagcaaggctgagaaaaacagcaatgtagaaactcta
aaagcagaagtaacaagtcttcaaaatgagaaagccgatctagacagaatcgtgcgtaaa
ctggaccaagagatggagcagctgaaccatcatacaacaacacgcacccagttggagatg
ctgaccaaagacaaagctgataaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaaattcattgttagggtattttcctaacaaaaagcagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacaggcttgctaaattgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaggaaggaagag
cagttgtccaattacgaagacaagctgtttgatgtttgcggtagccaagattttgaaagt
gatttagacaagcttaaagaagaaattgaaaaatcttccaaacaacgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacggacgaaaaccagtcctgc
tgccccgtctgtcagagagtttttcagacagaagccgaattacaagaagtcatcagtgat
ttgcagtccaaactgcggctggctccagataaactcaagtcaacagaatcagagctaaag
aaaaaagaaaagcggcgagacgaaatgctggggctcgtgcccatgaggcaaagcataatt
gatttgaaagagaaggaaatgccagaattaagaaacagactgcagagtgtcaatagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcttgggcgcaataatgcca
gaagaagaaagcgctaaagtgtgtctgacagatgttacaattatggagagatttcagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctgcaaggagtagac
ttggatagaactgttcaacaagtaaatcaggaaaaacaagaaaaacaacacaaattagat
acagtttctagtaagattgaattgaatcgtaagtttatacaggaccagcaggaacagatt
cagcacctgagaagtataacaaatgaacttaaatcggagaaacttcagatatccactaac
ttacaacgtcgtcagcaactggaggagcagactgtggagttatccaccgaagttcagtcc
ttgtacagagagataaaggatgctaaagaacagataagcccattggaaaccacactggac
aagttccatcaggaaaaagaagaaataatttgcaaaaaaactacaaatatcaaaataaca
caggataaaataaatgatatcaaagagaaggttaaaaatattcatggttatatgaaaaac
attgagaattatattcaagatgggaaagacgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaaagcgagaaacaccacgaaaagataaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctgcaggat
aaccttacattaagaaaaagaaatgaagaactgaaagaagttgaagaagaaagaaaacga
catttgaaggaaatgggtcaaatgcaggttttacagatgagaaatgaacatcagaacttg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggacgaaattatccactttaagaaagaacttcaaaaacctcaatttcgagatgct
gaggaaaagtatagagaaatgatgatcgttatgagaacaacggagcttgtcaacaaggat
ctggacatttattacaagaccctcgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaatcattcgtgacctttggcgaagcacctatcgtggacaagatatt
gaatatatagaaattaggtctgacgccgacgaaaacctgtcagcctctgataaacggcgg
aactacaactaccgcgtggtgatgctgaagggggatacggccttggatatgcgaggacgg
tgcagtgcggggcaaaaggtgttggcctccctcatcatccgcctggccctggcggaaaca
ttctgcttgaactgcggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgaatctcttgcacacgctttagttgagataataaaaagtcgctcacagcaacgt
aacttccagcttctggtaatcactcacgatgaagattttgtggagctcttagggcgttct
aaatatgtggagaaattctacagaatcaagaagaacattgatcagtgctcagagattgtc
aaatgcagtgttaactccctgggatcttatgttcattaa
DBGET
integrated database retrieval system