KEGG   Artibeus jamaicensis (Jamaican fruit-eating bat): 119037629
Entry
119037629         CDS       T07223                                 
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ajm  Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03440  Homologous recombination
ajm03450  Non-homologous end-joining
ajm04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ajm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    119037629 (RAD50)
   03450 Non-homologous end-joining
    119037629 (RAD50)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    119037629 (RAD50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ajm03032]
    119037629 (RAD50)
   03400 DNA repair and recombination proteins [BR:ajm03400]
    119037629 (RAD50)
DNA replication proteins [BR:ajm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    119037629 (RAD50)
DNA repair and recombination proteins [BR:ajm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     119037629 (RAD50)
    BRCA1-C complex
     119037629 (RAD50)
   NHEJ (non-homologous end-joining)
    MRX complex
     119037629 (RAD50)
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N Crescentin DUF1664 AAA_29 DUF2703
Other DBs
NCBI-GeneID: 119037629
NCBI-ProteinID: XP_036985787
LinkDB
Position
Unknown
AA seq 1312 aa
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNSELVAVQRSMVCTQKGRKTEFKTLEGVITR
TKHGERVSLSSKCAELDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVRECQTELKYLKQNKEEACEIRDQITSKEAQLTSSKEI
VRSYENELDPLKTRLKEIEQNLSKIMKLDNEIKALESRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QENIRARDSLIQSLAIQLELDGFERGPFSERQIKNFHKLVRERQEKEEETAHQLMNDFAE
KETLKQKQIDEIRDKKIGLGRIIELKSEILSKKQNELKNVKCELQQLEGSSDRILELDQE
LTKAEHELSKAEKNSNVETLKAEVTSLQNEKADLDRIVRKLDQEMEQLNHHTTTRTQLEM
LTKDKADKDEQIRKIKSRHSDELNSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSNYEDKLFDVCGSQDFESDLDKLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEMPELRNRLQSVNRDIQRLKNDIEEQETLLGAIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGVDLDRTVQQVNQEKQEKQHKLD
TVSSKIELNRKFIQDQQEQIQHLRSITNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LYREIKDAKEQISPLETTLDKFHQEKEEIICKKTTNIKITQDKINDIKEKVKNIHGYMKN
IENYIQDGKDDYKKQKETELNKVIAQLSESEKHHEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKRHLKEMGQMQVLQMRNEHQNLEEKIDNIKRNHSLAIGRQKG
YEDEIIHFKKELQKPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENLSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSKYVEKFYRIKKNIDQCSEIVKCSVNSLGSYVH
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcactttcttcagtcccctcacaattttggttggccccaatggggcg
gggaagacgaccattattgaatgtctaaaatatatttgtactggagatttccctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttcgagcc
cagattcgcctgcagttccgcgatgtcaacagcgagcttgtggctgtgcagcggtccatg
gtgtgcactcagaagggcagaaagaccgagtttaaaaccctggagggggtcattaccagg
acaaagcatggtgaaagggtcagtctcagctctaagtgtgcggaacttgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgttattttctgtcatcaagaa
gattctaattggcctttaagtgaaggaaaggctttgaagcaaaaatttgatgaaattttt
tcagcaacaaggtacattaaagccttggaaacacttcgacaggtgcgccagacacaaggt
cagaaagtaagagaatgtcaaacagaactaaaatatctgaagcaaaataaggaagaagct
tgtgagattcgtgatcagattactagtaaggaagcccagttaacatcttcaaaggaaatt
gtcagatcgtatgagaatgaacttgatccattgaagactcgtctaaaagaaattgaacaa
aatctctctaaaataatgaaacttgataatgaaattaaagccttggaaagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggaaaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatcgaggcttctcaat
caagaaaaatcagaactacttgttgaacagggtcgtctacagctgcaagcggatcggcat
caagaaaacatccgtgctagagattcattaattcagtctttggcaatacagttagaattg
gatggctttgagcgtggaccattcagtgaaagacagattaagaactttcacaaacttgtg
agagagagacaagaaaaggaagaagaaactgcccaccaactgatgaatgactttgcagag
aaagaaactctgaaacaaaaacagatagatgagataagggataagaaaattggactggga
agaataattgagctaaaatcagaaatcctcagtaagaagcagaacgagctgaaaaatgtg
aagtgcgaattacagcaattggaaggatcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacatgagcttagcaaggctgagaaaaacagcaatgtagaaactcta
aaagcagaagtaacaagtcttcaaaatgagaaagccgatctagacagaatcgtgcgtaaa
ctggaccaagagatggagcagctgaaccatcatacaacaacacgcacccagttggagatg
ctgaccaaagacaaagctgataaagatgaacaaatcagaaaaataaaatctaggcacagt
gatgaattaaattcattgttagggtattttcctaacaaaaagcagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacaggcttgctaaattgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaataatgagctaaaaaggaaggaagag
cagttgtccaattacgaagacaagctgtttgatgtttgcggtagccaagattttgaaagt
gatttagacaagcttaaagaagaaattgaaaaatcttccaaacaacgagccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacggacgaaaaccagtcctgc
tgccccgtctgtcagagagtttttcagacagaagccgaattacaagaagtcatcagtgat
ttgcagtccaaactgcggctggctccagataaactcaagtcaacagaatcagagctaaag
aaaaaagaaaagcggcgagacgaaatgctggggctcgtgcccatgaggcaaagcataatt
gatttgaaagagaaggaaatgccagaattaagaaacagactgcagagtgtcaatagagac
atacagcgcctaaagaatgacatagaagaacaggaaacactcttgggcgcaataatgcca
gaagaagaaagcgctaaagtgtgtctgacagatgttacaattatggagagatttcagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctgcaaggagtagac
ttggatagaactgttcaacaagtaaatcaggaaaaacaagaaaaacaacacaaattagat
acagtttctagtaagattgaattgaatcgtaagtttatacaggaccagcaggaacagatt
cagcacctgagaagtataacaaatgaacttaaatcggagaaacttcagatatccactaac
ttacaacgtcgtcagcaactggaggagcagactgtggagttatccaccgaagttcagtcc
ttgtacagagagataaaggatgctaaagaacagataagcccattggaaaccacactggac
aagttccatcaggaaaaagaagaaataatttgcaaaaaaactacaaatatcaaaataaca
caggataaaataaatgatatcaaagagaaggttaaaaatattcatggttatatgaaaaac
attgagaattatattcaagatgggaaagacgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaaagcgagaaacaccacgaaaagataaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaagatggctgcaggat
aaccttacattaagaaaaagaaatgaagaactgaaagaagttgaagaagaaagaaaacga
catttgaaggaaatgggtcaaatgcaggttttacagatgagaaatgaacatcagaacttg
gaagaaaaaatagataatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggacgaaattatccactttaagaaagaacttcaaaaacctcaatttcgagatgct
gaggaaaagtatagagaaatgatgatcgttatgagaacaacggagcttgtcaacaaggat
ctggacatttattacaagaccctcgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataaaatcattcgtgacctttggcgaagcacctatcgtggacaagatatt
gaatatatagaaattaggtctgacgccgacgaaaacctgtcagcctctgataaacggcgg
aactacaactaccgcgtggtgatgctgaagggggatacggccttggatatgcgaggacgg
tgcagtgcggggcaaaaggtgttggcctccctcatcatccgcctggccctggcggaaaca
ttctgcttgaactgcggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgaatctcttgcacacgctttagttgagataataaaaagtcgctcacagcaacgt
aacttccagcttctggtaatcactcacgatgaagattttgtggagctcttagggcgttct
aaatatgtggagaaattctacagaatcaagaagaacattgatcagtgctcagagattgtc
aaatgcagtgttaactccctgggatcttatgttcattaa

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