Artibeus jamaicensis (Jamaican fruit-eating bat): 119060600
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Entry
119060600 CDS
T07223
Symbol
CHD4
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
ajm
Artibeus jamaicensis (Jamaican fruit-eating bat)
Pathway
ajm03082
ATP-dependent chromatin remodeling
ajm05165
Human papillomavirus infection
ajm05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ajm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119060600 (CHD4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119060600 (CHD4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
119060600 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajm03036
]
119060600 (CHD4)
Chromosome and associated proteins [BR:
ajm03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119060600 (CHD4)
Chromatin remodeling factors
NuRD complex
119060600 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
119060600
NCBI-ProteinID:
XP_037016703
LinkDB
All DBs
Position
Unknown
AA seq
1939 aa
AA seq
DB search
MASGLGSPSLCSAGSEEEDMDALLNNSLPPPHPENEDDPEEDLSETETPKLKKKKKPKKP
RDPKIPKSKRQKKERVLLCRQLGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKL
GPKKEKKNKSKRKEEEEEEEDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKAF
SQFVRPLIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMV
TATEVAPPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRIPDAKKPKPKKVAPLKIKLGGF
GSKRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTA
MDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW
EAKEDNSEGEEVLEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLP
EIPNGEWLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPER
QFFVKWQGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPPSGDFGGDEEKSRKRKNK
DPKFAEMEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEI
QDYDLFKQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDA
TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVS
APLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEA
SVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLT
GTPLQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKAD
VFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNH
PYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDL
LEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTV
IIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRP
GLGSKTGSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRN
QDETEDTELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHH
YEQQQEDLARNLGKGKRIRKQVNYNDGSQEDRGVCGRPRPPPMGRSTRAVGPAHLPSLPP
DWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRPSRKGLRNDKDKPLPPLLARVGGNIEV
LGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRDLRGKSEKEFKAYVSLFMRHLCEPGAD
GAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHVNGRWSMPELAEVEENKKMSQP
GSPSPKTPTPSTPGDTQPNTPAPAPPVEDGIKIEENSLKEEENAEAEKEVKSAAPEATIE
CPQPPAPASEDEKVVIEPPEGEEKVEKAEVKERTEEPMETESKGVADVEKVEEKSAIDLT
PIVVEDKEEKKEEEEKKEVMLQNGETPKELNDEKQKKNIKQRFMFNIADGGFTELHSLWQ
NEERAATVTKKTYEIWHRRHDYWLLAGIINHGYARWQDIQNDPRYAILNEPFKGEMNRGN
FLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNMSEDPSHPSMALNTRFAEVECLAESHQ
HLSKESMAGNKPANAVLHKVLKQLEELLSDMKADVTRLPATIARIPPVAVRLQMSERNIL
SRLANRAPEPTPQQVAQQQ
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcctgggctccccgtccctctgctcagcgggcagcgaggaggaggatatg
gatgcacttttgaacaacagcctgcccccaccccacccagaaaacgaggatgacccagaa
gaggatttgtcagaaacagagactccaaagctgaagaaaaagaaaaaacctaagaaacct
cgggaccctaaaatccctaagagcaagcgccaaaaaaaggagcgtgtgctcttatgccgg
cagctgggggacagctctggggaggggccagagtttgtggaagaagaagaagaggtggct
ctgcgctcagacagtgagggtagcgactatacccctggcaagaagaagaaaaagaagctt
ggacctaagaaagaaaagaagaacaaatccaagcggaaggaggaagaggaggaggaggag
gatgatgattcaaaggagcctaaatcatctgctcagcttctggaagactggggcatggaa
gacattgaccatgtgttctcagaggaggattatcgcaccctcaccaactacaaggccttt
agccagtttgtccgacccctcattgccgccaaaaaccccaagattgctgtctccaagatg
atgatggttttgggcgcaaagtggcgggagttcagtaccaacaaccccttcaaaggcagt
tctggagcttcagtggcagcagcagcagcagcagcagtggctgtggtggagagcatggtg
acagccactgaagttgcaccacctcctccccctgtggaggttcctatccgaaaggcaaag
acgaaggagggcaaaggtcccaatgctcggaggaagcccaagggcagccctcgtatacct
gatgccaagaagcctaaacccaagaaagtggctcccttgaaaatcaagctgggaggtttt
ggttctaagcgtaagagatcctcgagtgaggatgatgacttagatgtagaatctgacttc
gatgatgccagtatcaatagctattctgtttctgatggttccaccagtcgtagtagtcgc
agccgcaagaaacttcgaaccactaaaaagaagaagaaaggcgaggaggaggtgactgct
atggatggttatgagacagaccaccaggactattgcgaggtgtgccagcaaggcggtgag
atcatcctgtgtgatacctgtccccgagcttaccacatggtctgcctggatccagatatg
gagaaggctcctgagggcaagtggagctgcccacactgtgagaaggaaggcattcagtgg
gaggccaaagaagacaattctgagggtgaggaggtcttggaagaggttgggggagacccc
gaagaggaagatgaccaccatatggaattctgtcgggtctgcaaggatggtggggagctg
ctctgctgtgacacttgtccttcttcttaccatatccactgcctgaaccccccacttcca
gagatccccaatggcgagtggctctgtccccgttgtacgtgtccagctcttaagggcaag
gtccagaagatcctaatctggaagtggggtcagccaccatctcccacaccggtgccccgg
cctccagatgctgatcccaatactccctctcccaagcccttggaggggcggccagagcgg
cagttctttgtgaaatggcaaggcatgtcttactggcactgctcctgggtgtctgaactg
cagctggaactgcactgtcaggtgatgttccgaaactatcagcggaagaatgatatggat
gagccaccttctggggactttggtggtgatgaagagaagagccgaaagcggaagaacaag
gaccctaaatttgcagagatggaggaacgcttctatcgctatgggataaagcctgagtgg
atgatgatccaccgaattctcaaccacagtgtggacaagaagggccatgtccactacttg
atcaagtggcgagacttaccctatgatcaggcgtcctgggagagtgaggatgtagagata
caggactatgacctattcaagcagagctattggaatcacagggagttaatgagaggtgaa
gaaggacgaccaggcaagaagctcaagaaggtgaagctgaggaagctggagaggcctcct
gaaactccaaccgttgatccaacagtgaagtatgagcgacagccggagtacctggatgcc
accggtggaaccctgcacccgtatcaaatggagggccttaattggttgcgcttctcttgg
gctcagggcacagacaccatcctggccgatgagatgggcctcgggaaaactgtccagaca
gcagtcttcctctattccctctacaaggagggtcattccaaaggccccttcctagtgagt
gcccctctctctaccatcatcaactgggaacgggaatttgaaatgtgggctccagatatg
tatgtggtgacttatgtgggtgacaaagacagccgggccatcatccgagagaatgagttc
tcctttgaagacaatgccattcgtggtggcaagaaggcctctcgcatgaagaaagaggca
tctgtgaagttccacgtgctgctgacatcctatgagttgatcaccattgacatggctatc
ttgggctctatcgactgggcttgcctcattgtggatgaggcccatcggctgaagaacaat
cagtcaaagttcttccgagtcttaaatggttactcactccagcataagctgttgctgact
gggactccattacaaaacaatctagaagagctgtttcatctgctcaactttctcactcct
gagaggttccacaatttggaaggcttcttggaggagtttgctgacattgccaaggaggac
cagattaaaaaactgcatgacatgctggggcctcatatgttgcggcgtctcaaagccgat
gtgttcaagaacatgccatccaagacggaactgattgtgcgtgtggagctgagccctatg
cagaagaaatactacaagtatatcctcactcgaaattttgaagcacttaatgctcgaggt
ggtggcaatcaggtctctctgctgaatgtggtgatggatcttaagaagtgctgcaaccac
ccgtatctctttcccgtggctgcaatggaagctcctaagatgcctaatggcatgtatgat
ggcagtgccctaatcagagcatctgggaaattattgctgctacagaagatgctcaagaac
cttaaggagggtgggcaccgtgtcctcatcttctcccagatgaccaagatgctggacctg
ctagaggattttttggaacatgaaggttataaatatgagcgtattgatggtggaatcact
gggaacatgcgtcaggaggccattgaccgtttcaatgcaccgggtgctcaacagttctgc
ttcctgctttccactcgagctgggggccttggaatcaatctggccactgctgacacagtt
attatctatgactctgactggaaccctcataatgacatccaggcctttagcagagctcac
cgtattggacaaaataagaaggtcatgatctatcggtttgtgacccgtgcgtcagtggag
gagcgtatcacacaggtggcaaaaaagaagatgatgctgacgcatctagtggttcggcct
gggctgggctccaagactggatccatgtctaaacaggagcttgatgacatcctcaagttt
ggcactgaggaactattcaaggatgaagccacagatggaggaggagacaacaaagaggga
gaggatagcagtgttatccactatgatgataaggccatcgaacgactgttggaccgtaac
caggatgagactgaagacacagaattgcagggcatgaatgaatatttgagctcattcaaa
gtggcccagtatgtggtgcgggaagaagaaatgggggaggaagaggaggtagaacgggaa
atcataaaacaggaagaaagtgtggatcctgactactgggagaaattgctgcggcaccat
tatgagcagcagcaagaagatttggcccgaaatctgggcaaaggaaaaagaatccgtaaa
caggtcaactacaatgatggctcccaggaggaccgaggtgtgtgtggccggccccgcccc
ccacccatgggccgttccactagagcagtgggccccgctcatctgccctctctccctcca
gattggcaggacgaccagtccgacaaccagtccgattattcggtggcctcagaggaaggt
gatgaagactttgatgaacgttcagaagctccccgcaggcccagtcgcaagggcctgcgg
aatgataaagataaaccattgcctcctctgttggcccgtgttggggggaatattgaagta
cttggttttaatgctcggcagcgaaaagcttttcttaatgcaatcatgcgatacgggatg
ccacctcaggatgcttttaccacccagtggcttgtgagagatctgcgaggcaaatcagag
aaagagttcaaggcttacgtctctctttttatgcggcatttatgtgagccaggagcagat
ggggctgagacctttgctgatggtgtcccccgagaaggcctgtctcgccagcatgtcctc
actaggattggcgtcatgtccttgattcgcaagaaggttcaggagtttgagcatgttaat
gggcgctggagtatgcctgaacttgctgaagtagaggaaaacaagaaaatgtcccagcca
gggtcaccttccccaaagacgcctacaccctctactccaggggacacacaacccaatact
cctgcacctgcgccacctgttgaggatgggataaaaatagaggaaaatagcctcaaagaa
gaagagaatgcagaagcagaaaaggaggttaaatctgcagcccctgaggccaccattgag
tgtccacagccccctgcccctgcctcagaggatgaaaaggtggttattgaacctcctgag
ggagaggagaaagtagaaaaggcagaggtgaaggagaggacagaagaacctatggagaca
gagtccaaaggtgttgctgatgtggagaaggtagaggagaagtcagcaatagacctgact
cccattgtggtggaggataaagaagagaagaaagaagaagaagaaaaaaaagaggtgatg
cttcagaatggagaaacccccaaggagctgaatgatgagaagcagaaaaaaaatattaaa
cagcgtttcatgttcaacattgcagatggtggttttactgagttgcactccctttggcag
aatgaagagagggcagccacagtcaccaagaagacttacgagatctggcatcgacgacac
gactactggctgctggctggcatcataaatcatggctatgcccggtggcaggacatccag
aatgacccacgctatgccatcctcaatgagcctttcaagggtgaaatgaaccgtggaaat
ttcttagagatcaagaataagtttctagcacgaaggttcaagctcctagaacaagccctg
gtgattgaggagcagctacggcgagcagcttacctgaacatgtcagaggacccctctcac
ccttccatggccctaaacacccgctttgctgaggtggagtgtttggcagagagtcatcag
cacctgtccaaggagtcaatggcaggaaacaagcctgccaatgcggtcctgcacaaagtt
ctgaaacagctagaagaattgctgagtgacatgaaagctgatgtgactcgactcccagct
actattgcccgaattcccccagttgctgtgaggttacagatgtcagagcgtaacattctc
agccgcctggcaaaccgagcacctgaacctactccacagcaggtagcccagcagcagtga
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integrated database retrieval system
