Acidovorax sp. JS42: Ajs_0233
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Entry
Ajs_0233 CDS
T00455
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ajs
Acidovorax sp. JS42
Pathway
ajs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ajs_0233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajs03400
]
Ajs_0233
Enzymes [BR:
ajs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Ajs_0233
DNA repair and recombination proteins [BR:
ajs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Ajs_0233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Glyco_hydro_47
Motif
Other DBs
NCBI-ProteinID:
ABM40487
UniProt:
A0A9J9FS47
LinkDB
All DBs
Position
complement(248739..249542)
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AA seq
267 aa
AA seq
DB search
MFKLTSLNLNGIRSATSKGVEAWIAQSRPDCICVQEIKAQSADMQGRFEELAGLKGYFHF
AVKKGYSGVGIYARHEPSDVVIGYGSSEFDTEGRYVELRFDTPARRLSIISAYFPSGSSG
EERQLAKFRFLEEFHPHLMRLKAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEERA
WMTKLLHISDPAGGLVDVYRQLQPETTDACYTWWSNRGQAYANNVGWRLDYHLATPAIAA
LARTEEIYKAQKFSDHAPITVGYELSL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaattaaccagtctcaacctcaacggcatccgctcggccacgtccaaaggggtc
gaggcatggattgcccaaagccggccggattgtatttgcgtacaggaaatcaaggcccag
tctgcggacatgcaggggcgtttcgaggagctggccggcctgaagggctacttccatttt
gcggtgaagaagggctactccggcgtgggcatctatgcgcgccacgagcccagcgacgtg
gtcatcggctacggctccagcgagttcgacaccgaggggcgctacgtggaactgcgcttt
gacacgcccgcgcggcgcctgtccatcatcagcgcctacttccccagcggctcctcgggc
gaggagcgccagttggccaagttccgcttcctggaggaattccatccgcacctcatgcgg
ctgaaggccgagcgggagttcatcctgtgcggcgacatcaacattgcccaccagcagatc
gacctgaagaactggcgcagcaaccagaagaacagcggctttttacccgaggagcgcgcc
tggatgacaaagttgttgcacatctctgaccccgcgggcgggctggtggacgtttaccgt
cagttacagccggagaccacggacgcttgctacacgtggtggagcaaccgtggccaggcc
tatgccaacaacgtggggtggcgcctggactaccacctggcgacgcccgccatcgcggcg
ctcgcgcgtaccgaggaaatctacaaggcgcagaagttcagcgaccacgcgcccatcacc
gtggggtacgagctgtcgctctga
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