Acidovorax sp. JS42: Ajs_3274
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Entry
Ajs_3274 CDS
T00455
Name
(GenBank) RNA polymerase, sigma-24 subunit, RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ajs
Acidovorax sp. JS42
Brite
KEGG Orthology (KO) [BR:
ajs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajs03021
]
Ajs_3274
Transcription machinery [BR:
ajs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Ajs_3274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_16
HTH_23
UBM
Motif
Other DBs
NCBI-ProteinID:
ABM43397
UniProt:
A0A9J9FX33
LinkDB
All DBs
Position
complement(3459753..3460388)
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AA seq
211 aa
AA seq
DB search
MTTPSPAPQEPADSDLRLVERTVAGDQRAYELLVIKYQRRIERLVARMVRDTDLVADITQ
ETFLRAYRALYQFRGEAQFYTWLYRIAVNTAKKALVDMKRNPVVTESALRGSSDSEDETS
FLDRELISDETPETVLAAQEIAAAVNAAMEALPEDLRQAVTLREIEGLSYEEIAVAMECP
IGTVRSRIFRAREAISARVKPLLERRSGKRW
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccccatcgcccgcgccccaagagcccgccgacagtgatctgcgattggtcgag
cgcaccgtcgcgggggaccagcgggcttatgaacttctggtcatcaaataccagcggcgc
atcgagcgcctcgtggcgcgtatggtgcgcgataccgatctggtggccgacatcacgcag
gaaacctttctgcgtgcctaccgagccttgtaccagttccgtggagaggcacagttctat
acctggctctaccgcatcgccgtgaacaccgccaagaaggcgctggtagacatgaaacgc
aatccggttgtcacggagagcgctcttcgcggcagcagcgactccgaagatgaaacttcc
ttcctggatcgtgaactaatcagcgacgaaacccccgaaaccgtgttggcggcccaggaa
atcgctgccgctgtcaatgcggccatggaggcattgcccgaggatttgcggcaggccgtg
actctgcgggagatcgaggggttgagttacgaggaaattgccgtagccatggaatgcccc
atcggtacggtgcgctcgcggatcttccgtgcgcgcgaggcaatttccgcgcgggtcaag
cctttgctggagaggcgctccggcaagcggtggtag
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integrated database retrieval system
