Acanthopagrus latus (yellowfin seabream): 119009407
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Entry
119009407 CDS
T08233
Symbol
ftr86
Name
(RefSeq) finTRIM family, member 86
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119009407 (ftr86)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alat04121
]
119009407 (ftr86)
Enzymes [BR:
alat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119009407 (ftr86)
Ubiquitin system [BR:
alat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119009407 (ftr86)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
U-box
TetR_C_41
WS_DGAT_C
MIP-T3_C
eIF3_N
DUF5082
Motif
Other DBs
NCBI-GeneID:
119009407
NCBI-ProteinID:
XP_036936552
EnsemblRapid:
ENSALTG00010007969
LinkDB
All DBs
Position
2:complement(24502633..24507189)
Genome browser
AA seq
615 aa
AA seq
DB search
MASAWPEEETFACPVCLDTLKDPATLPCGHSYCLVCIQSHWDKGHGKGQYSCPQCRQVFN
PRPSLARSTLLVEAMEKLRTSSIKQSPSAAVSSAPPSMPIYLEILPDTVPRQGSMYPKLP
TVEPRPCPQHNRPLDLFCHEDKECVCEVCCQHGHKGHHVLKPQEERKERQKELVQMQEDV
RRRIKETEKKLIEIPHAARQHKALVQALQQESTDLFSALIKNMSLTGDEVGELLSTHETA
LGSQVEGQIHSLEQEVAQLRWRSEELSRLANMQDHICFLKNFLIMEPLGEMGATGESILN
REEAVVASVRSAMRELQESIQDLCKASLAKIVTLVNQDPAAPTVNGAAAAAGTTAANISG
PATAENTVYEMMTDPPPLPPPRPQKHRDSSKSPSLRPAGPQASAPPPPSPPLPHATPVTT
SGLVNPEPKTREEMLKFRFEPTMDPNTVYRHVYLSDGGHKATMRAENVNPADHPERFHFW
RQVLCREPLAGSPYYWEVEWTGQKITIGVAYKEIERKSSDDDSRLGHNAQSWSLYWSGTG
FSFWHDGQEKQLGSPKTRRIGVFLDQHAGILAFYRIANNQAHLIHRHQSQFTGPLYPGFR
FWAGLGATVTICQLD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcctggcctgaagaggagacctttgcctgcccagtatgcctggacaccctg
aaggatccggccacgctaccttgcggacattcatactgcttggtctgtatccagagccac
tgggacaagggacacggcaagggtcagtacagctgccctcagtgtaggcaggttttcaac
cctcgtccctcgctggccaggagcactttgctagtggaggctatggagaaactgagaacc
agcagcatcaagcagagcccctctgcagccgtctcctctgccccgccttcgatgcccatc
tacctggagatcctacctgatacagtgccgcgtcaaggcagcatgtaccctaagcttccc
actgtggaacctagaccctgccctcaacacaaccgtcctctggacctgttttgccatgaa
gacaaggagtgcgtgtgtgaggtgtgttgccagcatggacacaagggacaccatgtgctc
aaaccacaggaagagaggaaggagagacagaaagagctcgttcaaatgcaggaagacgta
cggaggagaataaaggagactgaaaagaagcttatcgagattccacacgctgctcgccaa
cacaaggccctggtgcaggctctgcagcaagagagcacagatttgttctcagcgctcatc
aagaacatgagtctaacgggcgacgaggtcggtgagctcctcagcacccacgagaccgcc
ttaggcagccaggtcgaggggcagatccacagcctggagcaggaggtggcacagctgcgc
tggaggagtgaggagctgagcagactggccaacatgcaggaccacatctgcttcttgaag
aattttcttatcatggagccgctgggtgagatgggtgccaccggagagtcaatactgaat
cgggaagaggcagtggttgcctctgtccgctcagccatgagagaactacaggagtcgata
caggacctctgcaaagccagcctggccaagatcgtcacactagtgaatcaagaccctgca
gctccaacagttaatggtgcagcagcagcagcaggcactacagcagctaacatcagtggt
cctgccacagcagaaaacacagtgtatgaaatgatgacagaccctccacctttgccgcct
ccacgacctcaaaagcacagagattcatccaaatctccatctctacgtcctgcaggtcct
caagcttctgcccctcctccaccctcccctcctctgcctcatgcgacgcctgtaacaaca
tcgggtctcgttaatccggagccaaagacaagagaagaaatgctgaagtttcgcttcgaa
cccaccatggatcccaacacggtgtatcgccacgtgtatctgtcagatggaggtcataag
gcgacgatgcgggctgagaatgtgaacccagcagaccatccggagcgcttccacttctgg
agacaggttctctgcagagagcccctggcaggcagcccttactactgggaggtggagtgg
actggccagaagatcaccatcggcgtggcctacaaggaaattgaacgtaaaagttccgat
gatgacagccgtttgggccacaacgctcagtcctggagcttgtactggtccgggaccggc
ttctccttctggcacgacggccaggagaaacagctgggctcacctaagacccgacggatt
ggcgtctttctggaccagcatgcagggattctggccttttaccgcatcgccaacaaccag
gctcatctcatccaccggcaccagagccagttcactgggccactgtacccaggattcagg
ttctgggcagggttaggggcaacagtgaccatttgccagttggattga
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