Acanthopagrus latus (yellowfin seabream): 119010637
Help
Entry
119010637 CDS
T08233
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119010637 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119010637 (lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
Alanine_zipper
Death
DUF6061
Motif
Other DBs
NCBI-GeneID:
119010637
NCBI-ProteinID:
XP_036938837
EnsemblRapid:
ENSALTG00010027054
LinkDB
All DBs
Position
21:complement(27593690..27642750)
Genome browser
AA seq
1594 aa
AA seq
DB search
MQRVIRVLVAWCWVAVCVRAAMDECSDERGAAQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGATGVTKSCHICDAQDPRNHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREGGPWVPYQYYSGSCEKTYQKASHGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKDSRQQLVCNCKHNTEGDD
CNVCKAFYNDRPWRRATADNPNECLPCNCNGKSSECYFDAELYRATGHGGHCRNCADNTD
GPNCERCLDNYHRDQSGSRCLPCGCNSVGSESPQCDNRGVCACKPGVTGEKCDRCQPGFH
SLTEAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGYFNLDPNNPQGCTPC
FCFQHSSVCDSAEGFSVHTVSSSFSRDDEQWTGQQRDGSSVPVQWSPSGQEISLISEDYF
PMYFIAPEKFLGNQMLSYGQNLSLSFRVDRRDTRLSAEDLVLEGSDLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHADFQKLLHNLTSVKIRGTYSERSAGYLDDVSLVT
ARRGPGVPARWVEQCTCPQGYQGQHCEQCTLGYRRARPELGAFSPCELCNCNGHSDACDP
QTGACACQDNTAGLSCERCKDGFYGDATRGTSGDCEPCPCPAGATCAVVQKTREVVCTNC
PAGTTGKRCELCDDGFFGDPLGQSGPVRACRACKCSDNIDPNAVGNCNRETGECLKCIYN
TDGFFCDRCKDGFYGNALSTNPADKCKPCSCSPSGTVGRQTSCSQVTGQCQCLPNVAERD
CSSCEPGFFNLQSGNGCERCNCNPIGSTNGQCDIITGQCECQPGVTGLHCERCEVNFFGF
SSSGCKPCDCEPEGSQSGQCKEDGRCECRPGFVGARCDMCEENYFYNRSAPGCQQCPSCY
GLVRDKVNQQRQKLHDLQTLIDNLGSGQDTVSDKAFEDRLKEAERAILELLEEAQTSKDV
DRGLLDRLNGINNTLTTQWNRLQNIRNTVDDTGTQADRARNRVRDAESLIDRARQELDKA
KDAISKVDIKPPSGTGDPNNMTLLAEEARTLAEKHKIDADQIEKIAKDANDTSTKAYNLL
MKTLDGEGKTSQEIDELNKKYNEAKELAKNLEKQANKVRAEADEAGDKALKIFANLTSVP
VLDTKALEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLKGKEQEVRKLLEKGKSEQQTA
DQLLARADAAKALAEEAAKKGQSTFREAETILNDLRDFDKRVNDNKTAAEDAMKKIPAIN
ATIMAANEKTRQAEASLGNAAADAKEAKEKAEEAERIASTVQKGSAKTKEDAEKAFQDTN
KLDDEVSDMMDQLSAAEQELARKKAEADQDMMMAGMASDNAKEAEDNARKAKSAVKTVLS
TITALLDQLGNIDKVDLSKLNQIDESLKSAKGKMANSELDRKLVELNDVARTQEDMINDY
DRQIREIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagtgatccgggttctggtggcctggtgctgggtggcggtgtgcgtccgcgcg
gccatggacgaatgttcggacgagcgcggcgcggcgcagcgctgcatgccggagttcgtg
aacgccgcgttcaacgtgacggtggtggcgaccaacacctgcggctccccgccggaggag
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgcgacgcccag
gaccctcggaaccaccacagcgccgtgtacctgaccgactacaacaaccagcaggacacc
acctggtggcagagccagaccatgttggcgggcatccagtacccgaactccatcaacctc
accctgcacctcggtaaggccttcgacatcacctacgtgaggctcaagttccacaccagc
cgtcctgagagcttcgccatctacaagcggaccagggagggcggcccctgggtgccgtac
cagtactacagcggctcctgcgagaagacgtatcagaaggcgagccacggcttcatccgc
accggagaggacgagcagcaggcgctctgcaccgatgacttcagcgacatctcgccgctc
accggaggaaacgtggccttctccacgctggagggccgacccagcgcctacaacttcgac
aacagccccgtcctccaggactgggtgacggccaccgacatcagagtgacgctgaacagg
ctcaacacgtttggagacgaggtttttaacgaccccaaggtcctcaagtcctactactac
gccatctctgacttcgctgtgggaggaaggtgtaagtgtaacggccacgccagtgagtgt
gtgaaggacagccgacaacagctggtgtgtaactgcaaacacaacacggagggcgacgac
tgcaacgtctgcaaagcgttctacaacgaccggccgtggaggagagcgaccgccgacaac
cccaacgagtgtctgccctgcaactgtaatgggaagagttctgagtgttactttgacgcc
gagctgtaccgggccacgggtcacggaggtcactgcagaaactgcgccgacaacaccgac
gggccaaactgtgagcgctgcctcgacaactaccaccgagaccagagcggcagccgctgc
ctgccctgcggctgcaacagcgtcggctcagagtctcctcagtgtgacaacagaggagtg
tgtgcatgtaaaccaggtgtgaccggagagaagtgcgaccgctgccagccggggttccac
agtctgacggaggccggctgcaggccgtgttcttgctcgccctctggcagcactcaggag
tgtgacgtcaacactggacagtgtcgctgcaaagacaacgtggagggcttcagctgcgac
aggtgtaagctgggttacttcaacctggaccccaacaaccctcagggctgcacgccctgc
ttctgcttccagcactcgtctgtgtgcgacagcgccgaaggcttcagcgtccacaccgtc
agctcctccttcagcagagatgacgagcagtggacgggtcagcagcgtgatggctccagt
gtcccagtccagtggtctcccagtggacaggagatctccctcatctcagaggactacttc
cccatgtacttcatagccccagagaagtttttggggaaccagatgttgagttacggacag
aacctgagtctgagcttccgggtcgaccggcgggacactcgtctgtcggcggaggatctg
gtcctggagggatctgacctgagggtggccgtccccctcatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgactacccctgg
aggccgaccatcagccacgccgacttccagaaacttctccacaacctgacgtccgtgaag
atcagaggcacctacagcgagaggagtgctggatatctggacgatgtctccttggtgacg
gcgaggcggggtccaggtgttccagcccgctgggtggagcagtgcacctgtcctcagggt
taccaggggcagcactgtgagcagtgcactctgggatatcgtcgcgcccgtccagagctc
ggcgccttcagcccctgtgagctgtgcaactgtaacggacacagcgacgcctgcgaccct
cagacaggtgcgtgtgcctgtcaggacaacacggccggtttgagctgtgaacgctgtaaa
gacggtttctatggcgacgccacgcgggggacgtcaggtgactgcgagccctgtccctgt
ccggccggagccacctgtgctgtcgtgcagaagaccagagaggtggtctgcaccaactgt
cctgcaggaaccacaggtaagcgctgtgagctctgtgacgacggtttctttggcgaccct
ctgggtcagagcgggcccgtccgagcctgccgcgcctgcaagtgcagcgacaacatcgac
cccaacgccgtcggcaactgcaaccgtgagacgggagagtgtctgaagtgcatctacaac
accgacggcttcttctgcgaccgctgcaaggatggtttctacggcaacgccctcagcacc
aaccccgccgacaagtgcaaaccgtgctcctgttctccgtccggtaccgtgggtcgtcag
acgagctgctctcaggtcaccggtcagtgtcagtgtctccccaacgtggccgagcgcgac
tgcagctcctgcgagccgggcttcttcaacctgcagagcggcaacggctgcgaacggtgt
aactgtaatccgattggctccaccaacggtcagtgtgacatcatcacaggacagtgtgag
tgtcagcccggcgtcaccggcctccactgcgaacgctgcgaggtcaacttcttcggcttc
agctcgtctggatgcaaaccctgcgactgcgaacctgaaggctctcagtcgggtcagtgt
aaagaggacgggcgctgcgagtgtcggcccggctttgtcggagctcgatgtgacatgtgt
gaggaaaactacttctacaaccgctcggcgccgggctgccagcagtgtccgtcctgctac
ggtctggtcagagacaaggtgaaccagcagaggcagaagcttcacgacctgcagactctg
atcgataacctcggctcgggtcaggacaccgtcagcgacaaggcctttgaggaccggctg
aaggaggcggagcgagccatcctggagctgctggaggaggctcagaccagcaaagacgtg
gaccgcgggctgctggatcgtctcaacggcatcaacaacactctgaccactcagtggaac
cgactgcagaacatccgcaacacggtggacgataccggcactcaggccgaccgcgcccgc
aaccgagtgcgagacgccgagagcctgatcgaccgcgcccggcaggagctggacaaggcc
aaggacgccatcagcaaagtggatatcaaaccgcccagcggcaccggagatccaaacaac
atgacgctgctcgccgaggaggcccgaacgctggctgagaagcacaagatagacgccgac
cagatcgagaagattgccaaagatgccaacgacacgtcgaccaaagcgtacaacctgctg
atgaagactctggatggagagggcaagacgagccaggagatcgacgagctcaacaagaag
tacaacgaggccaaggagctggccaagaacctggagaaacaggccaacaaggtccgggcc
gaggcggacgaagccggagacaaagctctgaagatctttgccaacctgaccagcgtccct
gtgttagacaccaaagctctggaggacgaagccagtaagatcaagaaggaggcgtcggac
ctcgacaagctgatcgataagacggagaaggagtacaacgacctgagagacgacctgaag
ggcaaagagcaggaagtccgcaagctgctggagaaaggaaagagtgagcagcagacggca
gatcagctgttagctcgagccgacgctgccaaagctctggctgaggaggcagcgaagaag
ggccagtccaccttcagagaggccgagaccatcctgaacgacctgagagactttgacaag
cgggtcaatgacaacaagacggctgccgaggacgccatgaagaagatccccgccatcaac
gccacgatcatggccgccaacgagaagactagacaggcggaggcgtcgctgggaaatgct
gctgctgatgccaaagaggccaaggaaaaggctgaggaggccgagaggatcgccagcacc
gtgcagaagggctcagccaagaccaaggaggacgcggagaaggccttccaggacaccaac
aagctggacgacgaggtcagcgacatgatggaccagctgagcgccgcagagcaggagctg
gcccggaagaaggccgaggccgaccaggacatgatgatggcggggatggcgtcagacaac
gccaaggaggcagaggacaacgcccgcaaggccaagagcgccgtgaagacggttctgagc
accatcaccgccctgctggatcagctgggaaacatcgacaaggtggacctgagcaaactg
aaccagatcgacgagtccttgaagagcgccaagggcaagatggccaacagcgagctggac
aggaagctggtggagctgaacgacgtggcgcggacccaggaggacatgatcaatgactac
gaccggcagatccgcgagatccgcgcagacatcgccaacctgaacgacatcaagaacacg
ttacctgagggctgcttcaacacgccgtcactggagaggccttaa
DBGET
integrated database retrieval system
