Acanthopagrus latus (yellowfin seabream): 119014173
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Entry
119014173 CDS
T08233
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04010
MAPK signaling pathway
alat04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119014173 (cacna1ha)
04020 Calcium signaling pathway
119014173 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alat04040
]
119014173 (cacna1ha)
Ion channels [BR:
alat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119014173 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
119014173
NCBI-ProteinID:
XP_036945026
EnsemblRapid:
ENSALTG00010023536
LinkDB
All DBs
Position
23:complement(8888093..9013699)
Genome browser
AA seq
2513 aa
AA seq
DB search
MTDGEGRARFQYAECPEGQEQPEEVQEEVRLAIPTPYRKDAPGHDVDPGGGGGGGGEGGH
DGEEEEEVERRRRGSGDGGDWSPEVQEHEDQEPELEVEVGPTLGVRITAPIRDPDCVSEE
EEQQPWPALAPVAFFCLKQTTRPRNWCLRFVCNPWFEHVSMLVILLNCVTLGMFQPCEDV
SCQSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMAGVLEY
SLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGI
VGVQLWAGLLRNRCFLGEDIRTMYNLSISAYYMTEEGEDSPFICSAPRENGMLRCHDVPP
TDEGGSTCSMLPSQSLALTGSANSCINWNHYYNVCQPGDHNPHKGAVNFDNIGYAWIAIF
QVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENAL
MREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFTRRLQRIYSGWHSKRRKKVNP
NGSGGGSNGGGNGHGHGSSRGCGGPGSAMWLRPIHNLLQHHQHQHCRLSNGGQHSISVVT
TEHTDREEGVGGGEELEMKSLPVRRGSTNGNGAGGGGPSVVTQNMGALLGRLNGGMNYPT
ILPSFVCSYSSKTPPPHSQQCGPSPEQHPPNHPASEHTETLNKLYQLMGQHRRQRLLYQL
AGVVPSPLLLELLSCPMCARSLETLELELGDLEGGRGEADGLHDFPQGGELRSGRGRRRR
GVREYKNGVVRAWMGFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYHQQPEELTDVLE
ISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQADGGLSVLRTF
RLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSLKME
NGDTIPDRKNFDTLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVL
FNLLVAILVEGFQAEGDANRSESDDEKKSDNSEEDEKVEQLRDNELKMYSLMMTANGHID
PRGTMAPPIIMRTAATPMPTPKSSLGPESILGDDLMYREGVPQYSEAGLGFSEAGMGHSE
SRRGSATSIEPIAFDQRSLSLSSPGRRSPLPPRSWGSRRSSWNSLGRAPSLKRRDTSGER
ESLLSGEGGEEEDSGEDKGEAGGNNRLRSEPLELLQASTLCPSIIAEYGDCNGRTLTFDP
NVTADPKDDSSPEDDTDDDSSVCYWMKKELNNMKPRWCKEHEDWTLYLFSPESRCRAWCQ
SVISHKLFDHVVLVFIFLNCITIALERPDIEPKSPERKFLSVSNYVFTVIFLAEMAIKVV
ALGFCFGKQTYLQSSWNVLDGVLVFVSLVDILVSLAYTGGNRILGILRVLRLLRTLRPLR
VISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTKNIT
NKSDCLQASYRWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVRNHN
PWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRLKMIEKKRRSK
ENGGAEAKQRPYYADYSPLRLSIHTLCTSHYLDLFITFIICINVFTMSIEHYSQPQYLEE
ILKYCNYVFTFIFVIEAILKLAAFGIRRFFKDRWNQLDIAIVALSIMGIILEELKMSAAL
PINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALG
VELFGKLECNDKNPCEGLSRHATFANFGMAFLTLFRVSTGDNWNGIMKDTLRDCQPEDHC
LSYLPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIALEMAMER
QRKLSTTSNNSSVGGTYVGPCPNSPGQEEEVQYGDQNLLSPRKMSVSRMHSLPNDSYMFR
PVRPASAPYPLEEIDLSPQHQHSGSVTSVHSQPCDSRALLQVPDVSPSHPRTPPTITLPR
IAPPTPSPSPRALRRQVALKLDSVVSHGCEQQERPSPLHLPPPSPSPLPLHTSPPSPLPP
PPSSPSAVSLPPCSPSAFPLPPPSPLPPPPSSPSLLLPPPPSPRLPLRPPSLRRPRPPSA
ASFCDPADEEVYHITSSAQHRWRDKEGGGQESRGKTSRSHSLSPYNSPYSHDSASSPLPP
PLPPSSSRSALSLLGVGLKDRDFRKGLSPDSEGFQDKPTSLSAGYPDDQRRHSIEVCLPQ
AVITGDDQRFARDAHRSEKVSQAFPLRVQSVGGGHRKKKMSPPCISIHPPSEREHPHIAS
PPKLADCSMMLRRRTPSYDLTQHTNTQDVAQMHSPMHTPLTPIHVPLQAHSPTHTLTPSR
ASTPTHTPAYTPPSASTPTHPRIPISPNIFIQPHAPLLPHAMPFSQTHSLSPAARRSPLT
GDYMPLPQFTFDQPQSRYMSGISDADTATCSSPFDNRLGSSAGFSAKNRRTAQ
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcgctttcagtacgccgagtgcccggaggggcaggag
cagccggaggaggtgcaggaggaggtgaggctcgctataccgacgccctacaggaaggac
gccccgggtcacgatgttgaccccggaggaggaggaggaggaggaggagaaggaggccac
gatggggaggaagaggaggaggtggagaggaggaggagaggcagcggtgatggaggagac
tggagccctgaggttcaggagcatgaggaccaggagccggagctggaggtggaagttgga
ccgacacttggagttcgcatcacggctcctattcgcgatccagactgtgtctccgaggaa
gaggagcagcagccatggccggccctggcccccgtggccttcttctgcttaaagcaaaca
acaaggcctcgcaactggtgtcttcgcttcgtctgtaacccatggttcgagcatgtgtct
atgctggtgatcctgctcaactgcgtgactctggggatgttccagccctgtgaagacgtc
agctgccagtcagagtggtgccgcatcctacaggtattagacgactgcatctttgctttc
ttcgctgtggagatggtcatcaagatggtggccctgggaatttttggcccaaactgttac
cttggtgacaagtggaaccagcttgacttcgtcatcgtcatggcaggggtgttggagtat
tcactggacggccataacgccagtctgtcagccatccgtaccgtccgagtactcaggcca
ctgcgggccatcaacagagtaccaagtatgcggatcttggttacactgctgttggacacc
ctcccaatgctgggaaacgtccttctcctctgcttcttcgtctttttcatctttggcatc
gtcggggtccagctgtgggcggggctactgcgcaaccgctgcttcctgggagaggacatc
agaacgatgtacaacttgtccataagtgcttactacatgacagaggaaggcgaagacagc
ccctttatctgctcggctccccgcgagaacgggatgttgcgctgccacgacgtgccaccc
accgacgagggcgggagcacgtgctcaatgctcccttcccaaagtttagccctgaccgga
tcggccaacagctgcattaactggaaccattactacaacgtgtgtcagcccggggaccat
aaccctcacaagggagctgtcaactttgacaatatcggctacgcctggatagccatattc
caggtcatcacactggaaggatgggtagatatcatgtactatgtcatggacgctcactcc
ttctacaattttatatattttatactgctcattatcgtgggctctttcttcatgatcaac
ttgtgcctcgtggtcatcgccacccagttctctgaaacgaagcagagagagaacgccctg
atgagggagcagcgcgcccgctacatgtccaacgactccacgctcgccagctacagcgaa
ccgggctcgtgctacgaggagatgctacgctacatcagtcacctttatcgcaagttcaca
cgcagactgcagaggatatactctggatggcacagtaaaaggcgtaaaaaggttaatcca
aatggcagcggcggaggcagtaacggcgggggtaacggccacggccacgggtccagcagg
ggctgcggaggcccgggcagcgccatgtggttgagaccgatccataacctcctgcagcac
catcagcaccagcactgtcgcctcagcaacgggggccagcacagcatcagcgtggtgacg
accgagcacacggacagagaagagggggttggaggaggagaggagctggagatgaagtca
cttcctgtccggaggggaagcacaaacgggaatggcgctggtggcggcggcccgtccgtc
gtcacccagaacatgggggcgttgctcgggcgactgaacggagggatgaactacccgacg
attctgccgtcgttcgtgtgcagctacagcagcaagacgccgcccccccactcccagcag
tgtgggcccagtccggagcagcatccgccaaaccacccagcgtctgaacacacagagacg
ctgaacaagctctaccagctcatgggacagcacagacgccagaggctgctgtaccagctg
gcaggcgtggtgcccagccctctgctcctggagctgctcagctgccctatgtgtgcccgt
agcctggagactttggagctggagctgggagacctggagggaggcaggggagaggctgac
ggactgcacgacttcccccagggtggagagctgagatctgggagaggtcgcaggcgacgg
ggggtcagggagtacaaaaacggagtggttcgggcgtggatgggcttcagggaaaagctg
aagaggattgtggaaagtaaatacttcaaccgagggatcatgatcgcaatcctcgtcaac
actctcagcatggggatagagtaccaccagcagcctgaggagttgaccgatgtgttagag
atcagtaacatcgttttcaccagcatgtttgtcctggagatgggcttcatgctgctggcc
tttggcttgtttggatacatcaggaacccatacaacatattcgacagcatcattgtaatc
atcagtgtgtgggagataatcggtcaagcagacggtgggctttcagtcctgagaacattt
cgtctgctgcgggttctgaagctggtccgctttctgcccgccctgaggagacagctggtg
gtgctgatgaagaccatggacaatgtggccacattctgcatgctgctgatgcttttcata
tttactttcagtatactgggcatgcatctgtttggctgtaaattcagtctcaagatggag
aacggagacaccatccctgaccgcaagaactttgacactctgctctgggccatcgtcact
gtattccagattcttacccaggaggactggaatgtggtgttgtataacggcatggcctcc
acctctccgtgggcggcgctctactttgtcgctctcatgacatttggcaactatgtgctc
ttcaatttacttgttgccatcttggttgagggcttccaggccgagggtgatgctaatcgg
tcggagtcggatgatgagaagaaatcggacaactctgaggaggacgagaaggtggaacag
ctcagagacaatgagctcaaaatgtactctctaatgatgacagccaacggtcacattgac
cctcgtggcacgatggctcctcctattataatgcgcacggccgccacgcccatgcccaca
ccgaagagctccctgggacccgagtctatcctcggagacgacctcatgtacagagagggg
gtgcctcagtacagcgaggcgggcctgggcttttctgaagcaggcatgggtcactcagag
tctcgccgtggaagcgccacttccatcgagcctatagcctttgaccagcgttctctgagc
ctctcaagtcctggccggcgatcccctcttcctccccgctcgtggggcagccgccgctcc
agctggaacagcctgggaagagccccgagcctgaagaggcgagacacaagcggcgagagg
gagagcctgctgtctggggagggaggcgaggaggaggacagcggggaggacaagggggag
gccggggggaataacagactgcggtcggagcccctggagctgctgcaggcgtcgactctc
tgcccttccataatagccgagtacggtgactgcaacgggaggaccctgacctttgacccc
aacgtcaccgcagaccccaaggacgactcgtctcctgaggacgacacggatgatgacagt
tctgtgtgctactggatgaagaaagagctcaataacatgaagccccgctggtgcaaagaa
cacgaagactggacactgtatttgttctctccagagagccgatgccgcgcgtggtgccaa
agcgtgatctctcacaaattgttcgaccacgtggtcctggttttcatcttcctaaactgc
atcaccatcgctctggaacgacccgatatagagccgaagagcccggagcgaaagtttctg
agtgtgtccaactacgttttcactgtgatcttcctggcagagatggccattaaggtcgta
gctctcggcttctgctttgggaagcagacatacctccagtccagctggaatgttctggat
ggtgtgttggtgttcgtgtctctggtcgacattctggtctctctggcctacactggcgga
aacaggatcctgggcatcctccgagtcctacgcctgcttcgaacactacgcccactgagg
gtcatcagccgagccccgggattgaagctggttgtggagacgctcatcacctccctgaga
cccatcgggaacattgtgcttatctgctgcgccttcttcatcgtctttggcatcttgggg
gtgcagctgttcaaagggaagttctaccactgtgaaggcctggacacgaaaaacatcacc
aacaagtccgactgtctgcaggccagctatcgctggatacggaggaagtacaactttgac
aacctcatccaggctctgatgtctctgttcgtgctgtcctgtaaggacggctgggtcaac
atcatgtacgacggactggatgcggtgggagtggaccaacagcctgtgaggaaccacaac
ccctggatgctgctctacttcatctccttcctgctcatcgtcagcttcttcgtcctcaac
atgttcgtcggcgtcgttgtggagaacttccacaagtgccggcaggaccaggaggaggag
gaggcccgcttacgggaggagaagaggctcaaaatgatagagaaaaagcgcaggagtaag
gagaatggaggggctgaggccaagcagaggccctactacgccgactactcccccctgcgc
ctgtccatccacacactgtgcaccagccactacctggacctcttcatcaccttcatcatc
tgcatcaacgtcttcaccatgagcatcgagcactacagtcagccgcagtatttagaggag
attctcaagtactgcaactacgtgttcaccttcatcttcgtcattgaggcgattctcaaa
ctcgcagcgttcggcatacgcaggttcttcaaagacaggtggaatcagctggatatagcg
atagtggcgttgtccatcatgggcatcatcctggaggagctgaagatgagcgcagccctg
cccataaaccccaccatcatcaggatcatgagagtgctccggatagcacgagtgctgaaa
ctcctgaagatggccacagggatgagggctctgctggataccgtcatgcaagcgctgccg
caggtgggaaatctcggtctcctcttcatgctgctcttcttcatctacgctgcgctggga
gtggagctcttcggcaaactggagtgcaatgacaagaacccgtgtgagggtctgagtcgt
cacgcgaccttcgccaattttgggatggccttcctcacactgtttcgagtgtccactgga
gacaactggaatgggattatgaaagacacgttacgggactgtcagccagaggaccactgt
ctctcctacctgccactggtctctccgatttactttgtcacgtttgtgctcatggcccag
tttgtgctggtcaacgtggtggtggctgttctgatgaaacatctagaggagagcaacaag
gaggccaaagaggatgctgagatggatgcagaaatcgccttggagatggcgatggagagg
cagcgcaaattaagcacaacctccaacaacagttcagtgggagggacctacgttggacca
tgtccaaattcacctggacaggaagaagaggtgcagtacggtgaccagaacctgctgtcg
ccaaggaagatgtctgtatccaggatgcactctctgcctaacgacagctacatgttcaga
cctgtacggcccgccagcgccccctaccctttggaggagatagatctcagtccccagcac
cagcattcaggctcagtgacgtcggtccactcccagccatgtgacagtcgtgcgctgctg
caggtaccagacgtttcccccagtcacccccggacacctcccaccatcaccctgccccgc
attgccccgcccacgcccagcccctccccacgggccctgcgcagacaggtggcacttaaa
ttggattccgtggtgtctcatggttgtgagcaacaggagaggcccagccccctccatctg
cctcccccctccccttcccccctccctcttcacacctcgcccccatctcccctgcctcct
cctccctcctccccatctgcagtctctctcccaccttgctccccatccgccttcccactc
cctcctccctctcccctccctcctccgccgtcctccccctcgctcctcctcccaccccct
ccctcgccccgcctccccctgcgcccccccagccttcggaggccgaggccgccctccgcc
gcgtccttctgtgacccagcggatgaggaggtgtatcacatcaccagctcagcccagcac
aggtggagggacaaggaggggggagggcaggagagcagagggaagaccagccgcagccac
tccctctccccctacaactccccatactctcacgactctgcctcctcacctcttcctccc
ccgctgccaccttcctcctcgaggagcgcactcagtctgctcggggtgggattgaaggac
cgggacttcaggaagggtttgagccctgacagcgagggcttccaggacaagccgacatca
ttgtccgccggttaccctgatgaccagcggcgccactctatcgaggtctgcctcccgcag
gctgtcatcacgggtgacgaccaacgcttcgcacgagatgctcaccgctcggaaaaggtc
agtcaggcatttcccttgagggtgcagtcagtcgggggcggtcacaggaagaagaagatg
agtcccccttgtatatccatccacccgccctcagagagggaacaccctcacattgcttca
cctccaaaactggctgactgcagcatgatgctgagacgcaggacgccgtcctatgacttg
acccagcacacaaacacacaagacgtcgcgcagatgcattccccgatgcacacgccgctc
acacccatccacgtaccgctgcaagcacactcgccgacacacacgctgacaccctcccgg
gcatccactccgacacacactcctgcgtacactcctccatctgcatccacacccacgcac
ccacgcatcccgatcagcccgaacatcttcatccagcctcacgcacctcttctcccgcac
gcaatgcctttctcacagacacactccctctcccccgccgcgaggcgctcccctctcaca
ggtgactacatgcccctcccccagttcaccttcgaccaaccacagtccagatacatgagt
ggcatatcagacgctgacacggccacctgctcttcccctttcgacaacagactaggaagc
agtgcgggattcagtgcaaagaatcggaggactgcccaatga
DBGET
integrated database retrieval system
