KEGG   Acanthopagrus latus (yellowfin seabream): 119014499
Entry
119014499         CDS       T08233                                 
Symbol
atxn2l
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
alat  Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:alat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alat03019]
    119014499 (atxn2l)
Messenger RNA biogenesis [BR:alat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     119014499 (atxn2l)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 119014499
NCBI-ProteinID: XP_036945624
EnsemblRapid: ENSALTG00010006236
LinkDB
Position
23:24225310..24234678
AA seq 1060 aa
MAVAFVLVSRLSPAAVEALRVCDTTAPPAGVDTYHVGRCGRVLSNRAHLLPCFVVFQRRT
VFGLSNRVTSHWSDETGITGMHMTKKTRNTMKPPSQTQSSPLNSLMFEGVYNNARMLHFL
TAVVGSTCDVRVKNGAVYEGIFKTLSSQCELAVDAVHKQSDGDGGGGGGGGEEGGGRSPS
LPRIEDITDTMIFSPTDLVTMTCRDVDLSFAVRDTFTDTAISSVRVNGEHREKVLQRWDG
HGNGENFELEADTSNGWDANEMFKFNEEAYGVKSTYDSSLSMYTMPLEKGNSEVFRQREA
RAARLANEIESSLQYRRRVSLENDEGRSEEDKFSSVVREREERSSPGFSSSSREGKYIPL
PQRARDIGLSGSSMRAGGSGRTSAASSSRHPPPSSSSPKPPSDRSSPLSVRTAYSPHQSQ
SSPPAANSPPCTNHIPHSLSHPQALADTTRSSVNGVSSRTSPKSQRLQSNRNLRTPNSQS
SPAVSRGPKPDAPPQDLPLVGPSFLDSSPSAVTTANSTKPSGPTPLFPVDVNEILNAAAK
ERTDGGPGPSGPSGPSGPQEVKSSKAPSVQQRSQLEELRKFGKEFRMKKTKDGHVLQPSS
SPSVSPASADPPADSSSSPAPPKPSLTSSAQDLPPTTEAAATPAAPTPTAPAGPQSSGPE
GPAGATTAAPGSEEGCSESSDRSEAAVVQVKNSTLNPNAKEFLPIKVNAAVKPAPTPTPP
RPTPPSPSVVLPPQPGGGGGALYSNPPGHYLSYVSPLHIQGPSIQAPQMYQYSMSTVNQG
KYPRPKGPVVGQRPEHHPSPASPMISAAASAAGPPLVASPYPQSYLQYGQVIQAMPAHYH
GQAVYSMLQGGARMLTSGAPHQQMGHPGQYPGQAEGQPGPQQAVYAQSFQHHSGSIHHPQ
PSTTPTGSQPPPQHTAPSPGHNQVKVLSFTSSPAAPQPQSMFHSGGLSAPTPPNLQPGHS
SPQASYTMQGYGLPGHQALPHGFPSISQLSQAHVPGGMSGPHHSAGHGLPPVMLHYVSPQ
QGSGSNPQQGAPQHFYIGPPQAVQVQAHPTQQLSFHPSAN
NT seq 3183 nt   +upstreamnt  +downstreamnt
atggcggttgcgttcgttttagtatctcggctgagcccggctgctgttgaagctctccgg
gtgtgcgacacgactgcgccgcccgctggagtcgacacctatcacgtggggcggtgtggc
cgggttttgtcaaatcgagcgcacctgctgccgtgttttgttgtttttcagcggcggacc
gtgttcggcctgtcaaaccgtgtgacttctcactggagcgacgagactggaataacaggg
atgcacatgactaaaaagaccagaaacacaatgaagccaccgtcacagacccagtcctct
cctctgaacagcttaatgtttgaaggcgtctacaacaacgccaggatgcttcatttcctc
acagccgtcgtgggctccacctgtgatgtcagagtgaaaaatggcgccgtgtacgaggga
atcttcaagactttaagctcacagtgtgagctggctgtggatgctgttcataaacagagt
gatggagatggaggaggaggaggaggaggaggtgaggagggaggtggaagatcgccctct
cttccgaggattgaagacatcactgacacgatgatcttcagtcccaccgacctggtgact
atgacctgccgtgatgtcgacttgagcttcgccgtcagagacacattcactgacacagcc
atcagctctgtgagggtgaacggtgaacaccgggagaaagttctgcagcggtgggacgga
catggaaacggagaaaacttcgagctggaggcggacacatcaaacggctgggacgctaac
gagatgttcaagtttaacgaggaggcgtacggcgtcaagtccacctacgactccagcctc
tccatgtacaccatgcctttagagaaagggaactctgaggttttccgtcagcgggaggct
cgagcagctcggttagccaatgagatcgagagcagcttgcaataccgccggcgggtttct
ttagagaacgacgaggggcggagcgaggaggacaaattcagctcggtggtccgagagagg
gaggagcggtccagccccgggttctcctccagcagcagggagggtaaatacatccctctc
cctcagcgggcccgagacatcggcctgtcgggcagcagcatgagggccggaggctccggt
cgaacctcagcagcctcctcctccagacacccgccgcccagctcctcctcccccaaacct
ccttctgacaggagcagcccgctgtccgtcaggaccgcctactctccacaccaatcacag
agcagcccgccggcagccaacagccctccctgcaccaatcacatcccacactccctgtcc
catcctcaggcgctggccgacaccacgcgctcgtctgttaacggagtgtcatccagaact
tctccaaagtctcagagactccagagcaacagaaacctgcgaacacccaactcccagtcc
tcccccgcagtgtctcgtggtccgaaaccagacgcccctccccaggacctccccctggtt
ggcccctccttcttggactcctccccctccgctgtcactacggcaaactccaccaaaccc
tccggcccgaccccgctgttccccgtcgatgtgaacgagatcctgaacgcggcggctaaa
gagcgaactgacggtgggcccggtccatccggtccatccggtccatccggtccacaggaa
gtaaagagcagtaaagctccctcagtgcagcagaggtctcagctggaggagctgcgcaag
ttcggcaaagagttcaggatgaaaaaaacaaaagacgggcacgtgctgcagcccagctcg
tctccctcagtgagtccggcctctgcagatcctcctgcagactcctcctcctctcccgcg
cctcctaaaccctccctcacctcctccgcccaggacctgccgccgaccacagaggcagca
gcgacccccgctgccccgacaccgacggctcctgctggccctcagtcctctgggccggag
gggccggctggagcgaccacagcggctcccggcagtgaggagggctgttcagagagcagc
gacagatctgaggctgcggtggtgcaggtgaaaaactcaacgttgaatccaaacgcaaaa
gagtttcttcccatcaaagtgaacgcagctgtgaaaccagctccgaccccgacgcctcct
cgaccgaccccacccagcccctccgtggttctgcctccacagccaggcggaggaggagga
gccctctacagcaacccacctggacactacctgtcctacgtctccccgctccacatccag
ggtccctccatccaggctcctcagatgtatcagtacagcatgtcgaccgtcaaccagggc
aaataccccagacccaaaggtcctgtggtgggtcagcgtccggagcaccatccctccccc
gcctcccccatgatctcagctgcagcctcggcagcaggacccccgctggtggcctcacct
tacccccagtcctacctgcagtacggtcaggtgatccaggccatgccggcgcactatcac
ggacaggcggtgtactcgatgctgcagggaggtgcgaggatgctgacgtccggggcgcct
catcagcagatgggtcatccgggtcagtaccccggccaggctgagggccagccgggccca
cagcaggccgtgtacgctcagtcgttccagcaccactcgggctccatccatcacccccag
ccctccaccacccccacaggaagccagcctccaccccagcacacagcacccagtccagga
cacaaccaggtaaaggtgctgtcatttacgtcgagtccggcggctcctcagcctcagtcc
atgttccactctggaggtctgtcggctccgactcccccgaacctgcagccgggccacagc
tccccgcaggcctcctacaccatgcagggctacgggctcccgggccaccaggcgctgccc
catggcttcccctccatcagccagctgtcacaggctcacgtccctggaggcatgtccggt
ccgcaccactctgcgggtcacggcctgccgcccgtcatgctgcactacgtctcgcctcag
cagggcagcggctccaacccccagcagggggcgccacaacacttctacatcggaccacca
caagctgttcaggttcaggctcacccgacccagcagctgtccttccacccgtctgctaac
tga

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