Acanthopagrus latus (yellowfin seabream): 119016832
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Entry
119016832 CDS
T08233
Symbol
col28a1a
Name
(RefSeq) collagen, type XXVIII, alpha 1a isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alat01002
]
119016832 (col28a1a)
Peptidases and inhibitors [BR:
alat01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
119016832 (col28a1a)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
CBM-like
Motif
Other DBs
NCBI-GeneID:
119016832
NCBI-ProteinID:
XP_036949027
EnsemblRapid:
ENSALTG00010009005
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All DBs
Position
3:complement(15026748..15055707)
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AA seq
1168 aa
AA seq
DB search
MSTWWLLKILILTLALSSPTRGQKRRRKGQKDDNQIIVNEAKTLICPVEIMFIVDSSEKA
KTLLFERQKDFILRFSTKLMQLHSSGWRLRLRLAALQYSSTVSVEHNFRDWQDLDVFQSR
VASMTFIGHGTYSSYAITNATKVFSRETSPSSLRVALLMTVGNDHPRSPSAVMAAAEAKQ
HNIRVFTIRLSSLPKDDPMDAKLRSIASAPPQQHVLSLADSHLEDKLFSELNTIVKTGCP
QPKTCLCERGERGHPGNPGKPGEPGSDGFQGPKGSRGEPGINGRPGMEGLGGRPGSKGEK
GEQGECGAPGKKGEQGSDGPPGPRGPRGEQGARGGPGDQGPEGQSGSKGDRGLRGVPGPP
GDNGVGFPGPKGDKGNHGRPGPPGPMGRGEPGTLGPAGPPGMQGSPGFPGEGLQGPKGDR
GYEGPKGSRGPTGVGYKGDKGNTGASGLPGLVGFPGAGIQGEKGEQGPVGPSGPRGPPGL
GIVGPKGDQGFPGEPGLQGVRGVGEPGPKGEPGPDGSPGIPGIPGEDGAVGSKGEMGLPG
LRGLEGDPGKGIPGEKGDRGDRGPRGLSGSPGPSGPAGAKGEPGSPGMTGLPGPAGQGLP
GQKGDPGPVGPTGLVGEPGVGIIGPKGNKGNLGPVGPPGKKGDGFPGPQGLPGLPGVQGE
MGPEGKGLPGSKGDRGLPGVPGPSGPPGIGLYGTKGSTGQPGPPGLLGPPGEGIQGPKGE
PGFQGPMGPRGAPGDGLPGEKGDRGIPGDRGRKGDRGDYGEPGSTGPMGRDGEKGEPGLT
REEVIRIIREICGCGLKCRESPLELVFVIDSSESVGPENFELVKDFVNALIDRVSVSREA
SRIGVVLYSHVEMVVVSLQQQSSQDDIKAAVRKMPYLGEGTFTGSAIHRANQLFQASRPG
VRKVAVVLTDGQADSRDVLQFEQTATEAHEQGIEMFVIGVVNRTDPLYELFQAEMNVIAS
DPDDEHVYLIDDFRALPTVESKILSRICEQDDTMVFLPKSVTEILPEAPEDSIHKEFPDE
EIIQVEIPVETVTAPTLHPQESGRANKNLVDGKVLVTPDIVFASPGGRGRQGPGVNSVVG
PKTLTDWLYEEVSTQTPVSPPPPPLTDSPLPDQGCSQPLDPGPCRQYKVRWYYDPEANAC
AQFWYGGCQGNANNFETEADCKNACVYT
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagtacctggtggctcctaaagatcttgatcctcaccctggcactgtcaagcccgacc
agaggccagaagagaaggaggaaagggcagaaagatgacaaccagatcatcgttaatgag
gccaaaaccctgatctgcccggttgagatcatgttcattgtagacagctcggagaaagcc
aaaactctgctgtttgagcgacagaaggacttcatccttcgcttcagcaccaagctcatg
cagctccactcgtcgggctggcgtctgcggctgcgcctggccgctctgcagtacagcagc
accgtgtcagtggagcacaacttcagagactggcaggacttggacgtcttccagagccgg
gtggcctccatgaccttcatcggccacggcacctactcctcttacgccatcaccaacgcc
accaaggtgttcagccgcgagacctcccccagcagcctgagggtggcactgctgatgacg
gtcggaaatgaccacccacgcagccccagcgctgtgatggccgctgctgaggccaaacag
cacaacatcagggtgttcaccatcagactgtcaagcctgccaaaggatgatcccatggat
gcaaaactgcgatccattgcaagtgcccccccacagcagcatgtcctcagtctcgccgac
agccatctggaggacaagctcttcagtgaactaaacacaattgtcaaaactgggtgccca
cagccaaagacctgtttgtgtgagagaggagagaggggtcaccccggaaatccagggaaa
ccaggcgagccggggtctgatggatttcaaggtccaaagggatctcgcggggaacctggc
attaatggacgtccaggaatggaaggccttgggggtcgacctggaagcaaaggggaaaag
ggagaacagggtgaatgtggtgcccctggtaaaaagggagaacaaggttcagatggacct
cctggccccagaggacccagaggggagcagggagccaggggaggacctggagaccagggt
ccagaggggcaatctggatctaaaggtgatcgaggactgaggggtgtacctggaccacca
ggagataacggcgttgggttccctggaccaaagggtgacaaggggaaccatggaagacca
ggtcctcctggaccaatgggaaggggcgaaccaggaacactgggtccagcagggccacca
gggatgcaaggatctccagggtttcctggtgagggtctccaagggcccaagggtgacagg
ggttacgagggtcccaagggcagccgtggacctacaggagtcgggtacaaaggtgataag
ggaaacacaggagcctctgggctgccgggtttggtggggtttccaggggcaggcatccaa
ggagaaaagggtgaacaagggcctgttggaccttctgggccgagaggacctcctggactt
ggtatagtcggaccaaagggtgaccagggtttccccggagagcccggacttcagggagtg
aggggtgttggtgagccaggaccaaagggagagccagggcccgatggttcacctgggata
cccggcattcctggtgaggatggagctgttgggtctaagggagagatggggttgccaggt
ctgcggggcctagagggagatccagggaaaggcattcctggagaaaagggagatagaggt
gaccgtggccctaggggactttcagggtctccaggcccatctggacctgctggagctaag
ggagagcctggcagtccaggaatgacgggcctacctggacctgctggacagggtttacct
ggacaaaagggagatcccggcccggtaggacctactggacttgtcggagaacctggggtc
ggaatcatcggaccaaagggtaacaaaggaaatcttgggcctgtggggccaccaggaaag
aagggggatggattcccaggaccacaggggctgcctggcttaccaggggtgcaaggagaa
atgggaccagaggggaaaggactacctggatcgaagggtgacagaggtttaccaggggtg
ccggggccatcaggtcctcccggaattggactttacggaacaaagggctccacagggcaa
ccaggtccaccaggtctgctagggcctccaggagagggcatccagggaccaaagggagag
cccgggtttcaggggccaatgggtcctcggggggcaccaggagatggccttccaggggaa
aagggtgatagaggcattcccggagaccgagggaggaaaggtgacaggggagattatggc
gaacctggatctacggggccgatggggagagatggagaaaagggggagccagggctaacg
agagaagaagtcatcaggataataagggaaatctgtggttgtggtctgaagtgcagagag
agccctctggagctagtgtttgtcatagacagctccgagagcgtcggaccagaaaacttt
gagctggtgaaggactttgttaacgctctcatcgaccgggtgtcggtgagccgcgaagcc
agtcgtattggcgtggtcctctacagccatgtggagatggttgtggtcagtctgcagcag
cagtcaagccaggatgatatcaaggctgctgtcagaaagatgccttacctgggcgagggc
accttcacaggcagcgccatccatcgagccaaccagctgttccaggcctcccggcccggt
gtgaggaaggtagctgtggttttaacggacggacaagccgactcacgcgacgtcttgcag
tttgagcaaacggcaacagaagcccacgagcaagggatagagatgtttgttataggagtc
gtgaacaggactgaccctctgtatgaattgttccaggcagagatgaatgtaattgcctct
gatcctgatgacgagcacgtctacctcatagatgacttcagggcacttcccactgtggaa
agcaaaatactgagtcggatttgtgagcaggatgatacaatggtatttctaccaaagtct
gttacggaaatcctcccggaggctccagaggacagcatccacaaagagttcccagatgag
gaaatcatacaagtcgaaatcccagtggaaacagtaacagccccgactctgcatccccag
gagtcaggtcgagctaacaagaacctggtcgacggtaaagtgttggtgacgccagacatc
gtgttcgcctctcctgggggcagggggcggcagggccctggggtgaactccgtggtgggt
cctaaaactctgactgactggctgtatgaggaagtgagcacacagacaccagtcagccct
cctcctccacccctcacagactcaccgctgccagatcaagggtgcagccagccactggac
cctggtccctgtcgacagtacaaagtcaggtggtactacgaccctgaggccaatgcttgt
gcccagttctggtacggaggctgtcagggcaacgccaacaacttcgagactgaagccgac
tgcaagaacgcctgcgtctacacgtaa
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